RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TRIM58Q8NG06 486 aa12.01□□□□□ -0.49
CACNA1C-215ENST00000399637 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
CACNA1C-215ENST00000399637 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
CACNA1C-215ENST00000399637 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-215ENST00000399637 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
CACNA1C-215ENST00000399637 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 GYG1P46976 350 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 BFSP1Q12934 665 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 SLC12A1Q13621 1099 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 PPP2R5EQ16537 467 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 TPCN1Q9ULQ1 816 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 RNF8O76064 485 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 MMP10P09238 476 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 TECP42680 631 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 PHEXP78562 749 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 SZRD1Q7Z422 152 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 SLFN13Q68D06 897 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 H7C0C1 242 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 DIAPH2O60879 1101 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ATP5OP48047 213 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 CAPN12Q6ZSI9 719 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 TBRG4Q969Z0 631 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1C-215ENST00000399637 RPGRIP1Q96KN7 1286 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 HYOU1Q9Y4L1 999 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 SERPINB6P35237 376 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 PDCD2Q16342 344 aaPredicted RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 ANKRD20A4Q4UJ75 823 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ANKRD20A2Q5SQ80 823 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ANKRD20A1Q5TYW2 823 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 FAM227BQ96M60 508 aa12□□□□□ -0.49
CACNA1C-215ENST00000399637 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
CACNA1C-215ENST00000399637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 GSTA4O15217 222 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 RLBP1P12271 317 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 OSTNP61366 133 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 WHAMMP3Q1A5X7 153 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 TSC1Q92574 1164 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SAR1BQ9Y6B6 198 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 ZAP70P43403 619 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 CTSWP56202 376 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 BAIAP2L1Q9UHR4 511 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 NOP14P78316 857 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 F8W8V4 182 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SCHIP1Q9P0W5 487 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 hCG_1642624A0A1W2PR95 340 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 STX1BP61266 288 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 MFSD1Q9H3U5 465 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SLC38A10Q9HBR0 1119 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 SMYD2Q9NRG4 433 aa11.99□□□□□ -0.49
CACNA1C-215ENST00000399637 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 GNGT2O14610 69 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 BUB1O43683 1085 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 SIK1P57059 783 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 NVLO15381 856 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 MYL7Q01449 175 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 ASPHQ12797 758 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 FAM95CA0A1B0GW59 222 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 MAP7D3Q8IWC1 876 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
CACNA1C-215ENST00000399637 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms