RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 RPF1Q9H9Y2 349 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 KCNK3O14649 394 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 HUNKP57058 714 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 GBP6Q6ZN66 633 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 RMDN3Q96TC7 470 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 NAPGQ99747 312 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 DESI2Q9BSY9 194 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 FAM184BQ9ULE4 1060 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 HHATQ5VTY9 493 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 NARFQ9UHQ1 456 aa15.09■□□□□ 0.01
CACNA1C-211ENST00000399617 PPP1R2P41236 205 aa15.08■□□□□ 0.01
CACNA1C-211ENST00000399617 NR5A1Q13285 461 aa15.08■□□□□ 0.01
CACNA1C-211ENST00000399617 GKAP1Q5VSY0 366 aaPredicted RBP15.08■□□□□ 0.01
CACNA1C-211ENST00000399617 SIX6OS1Q8N1H7 587 aa15.08■□□□□ 0.01
CACNA1C-211ENST00000399617 TRIM56Q9BRZ2 755 aaKnown RBP15.08■□□□□ 0.01
CACNA1C-211ENST00000399617 IQCA1LA6NCM1 817 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 MTMR2Q13614 643 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 SCARF1Q14162 830 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 TTLL11Q8NHH1 800 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 OSBP2Q969R2 916 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 PTPRTO14522 1441 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 ECE1P42892 770 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 RPS6KA2Q15349 733 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 SPATA24Q86W54 205 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 TRPC7Q9HCX4 862 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 KCNH4Q9UQ05 1017 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 DPEP1P16444 411 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 GPATCH4Q5T3I0 446 aaKnown RBP15.08■□□□□ 0
CACNA1C-211ENST00000399617 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 SAMD7Q7Z3H4 446 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 TMC4Q7Z404 712 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 SNX21Q969T3 373 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 PDIA3P30101 505 aaKnown RBP15.08■□□□□ 0
CACNA1C-211ENST00000399617 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 GABPB2Q8TAK5 448 aaPredicted RBP15.08■□□□□ 0
CACNA1C-211ENST00000399617 MSTO1Q9BUK6 570 aa15.08■□□□□ 0
CACNA1C-211ENST00000399617 RPAP3Q9H6T3 665 aaPredicted RBP15.08■□□□□ 0
CACNA1C-211ENST00000399617 USP17L10C9JJH3 530 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 PGBD3Q8N328 593 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 HAUS1Q96CS2 278 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 SPATA33Q96N06 139 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 RILPQ96NA2 401 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 ACTN1P12814 892 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 CEP85LQ5SZL2 805 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 RAPH1Q70E73 1250 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 SDCCAG8Q86SQ7 713 aaPredicted RBP15.07■□□□□ 0
CACNA1C-211ENST00000399617 AIFM3Q96NN9 605 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 IFIH1Q9BYX4 1025 aaKnown RBP15.07■□□□□ 0
CACNA1C-211ENST00000399617 RBSNQ9H1K0 784 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 IL1RL1Q01638 556 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 TTC14Q96N46 770 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 TMEM260Q9NX78 707 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 NEMP1O14524 444 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 PPP2R5BQ15173 497 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
CACNA1C-211ENST00000399617 FASTKD5Q7L8L6 764 aaKnown RBP15.07■□□□□ 0
CACNA1C-211ENST00000399617 HSPH1Q92598 858 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 NAP1L3Q99457 506 aaPredicted RBP15.07■□□□□ 0
CACNA1C-211ENST00000399617 POLR3EQ9NVU0 708 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 SYNDIG1LA6NDD5 238 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 HDAC11Q96DB2 347 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 ANGPTL3Q9Y5C1 460 aa15.07■□□□□ 0
CACNA1C-211ENST00000399617 USP17L15C9J2P7 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L11C9JVI0 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L18D6R9N7 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L22D6RA61 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L19D6RCP7 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L20D6RJB6 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 PIK3R2O00459 728 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 GNL1P36915 607 aaPredicted RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L24Q0WX57 530 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 DCAF4L1Q3SXM0 396 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 ANKS4BQ8N8V4 417 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 ACCSQ96QU6 501 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 RRAGCQ9HB90 399 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 AMFRQ9UKV5 643 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 FCER1AP12319 257 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 STXBP2Q15833 593 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 RNF219Q5W0B1 726 aaPredicted RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 RPUSD2Q8IZ73 545 aaKnown RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 SSH3Q8TE77 659 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 PPP4R1Q8TF05 950 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 EXT2Q93063 718 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 HOXC10Q9NYD6 342 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 MYOM2P54296 1465 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 SGK1O00141 431 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 ACTN4O43707 911 aaKnown RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 NSFP46459 744 aaKnown RBP15.06■□□□□ 0
CACNA1C-211ENST00000399617 MLKLQ8NB16 471 aa15.06■□□□□ 0
CACNA1C-211ENST00000399617 RNF146Q9NTX7 359 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms