RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 TLK1Q9UKI8 766 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 WASHC5Q12768 1159 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 DNM3Q9UQ16 869 aa13.54□□□□□ -0.24
CACNA1C-209ENST00000399603 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 HSPD1P10809 573 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 DNM2P50570 870 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 PTK2BQ14289 1009 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 MRPS26Q9BYN8 205 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 A6NJR5 290 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 RHOBTB1O94844 696 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CPP00450 1065 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 PHKBQ93100 1093 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 DBNDD2Q9BQY9 259 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 ANP32DO95626 131 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 KRT7P08729 469 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 SLC9A1P19634 815 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 PCGF5Q86SE9 256 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 TEKT4Q8WW24 435 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 ATP10AO60312 1499 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CHL1O00533 1208 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 SEC24DO94855 1032 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 KHDRBS2Q5VWX1 349 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CCNYQ8ND76 341 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 KLC2Q9H0B6 622 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 CHMLP26374 656 aa13.53□□□□□ -0.24
CACNA1C-209ENST00000399603 BNIP3LO60238 219 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 HDAC4P56524 1084 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 CREB3L3Q68CJ9 461 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 TDRD7Q8NHU6 1098 aaKnown RBP13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 LZTS3O60299 673 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 TIMM10P62072 90 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 ATP8A1Q9Y2Q0 1164 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 PASKQ96RG2 1323 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 PJA2O43164 708 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 HADHAP40939 763 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 NDEL1Q9GZM8 345 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 HPS4Q9NQG7 708 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.24
CACNA1C-209ENST00000399603 KCNQ3O43525 872 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 TNNC2P02585 160 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 FGFR1OP2Q9NVK5 253 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 L3MBTL1Q9Y468 752 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 NDUFB9Q9Y6M9 179 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 YEATS2Q9ULM3 1422 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 MOCS3O95396 460 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 TMED10P49755 219 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 ANO1Q5XXA6 986 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 STX19Q8N4C7 294 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 SLC38A10Q9HBR0 1119 aa13.52□□□□□ -0.25
CACNA1C-209ENST00000399603 NLRP12P59046 1061 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 NSUN2Q08J23 767 aaKnown RBP eCLIP13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 TMOD1P28289 359 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 DEUP1Q05D60 604 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 EPAS1Q99814 870 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 USP26Q9BXU7 913 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 DYNLT1P63172 113 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 MECOMQ03112 1051 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 C6orf118Q5T5N4 469 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 MOSPD1Q9UJG1 213 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 PYGBP11216 843 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 STAT2P52630 851 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 GRIN1Q05586 938 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 DONSONQ9NYP3 566 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 ZNF496Q96IT1 587 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 NUDCD1Q96RS6 583 aa13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-209ENST00000399603 POLE3Q9NRF9 147 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms