RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FKBP15Q5T1M5 1219 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZNF662Q6ZS27 426 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CCDC84Q86UT8 332 aaPredicted RBP19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TSG101Q99816 390 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SOWAHDA6NJG2 315 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EFCAB8A8MWE9 144 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CYP3A4P08684 503 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SREBF1P36956 1147 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MAP3K9P80192 1104 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CDK17Q00537 523 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 DLGAP5Q15398 846 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PTPN21Q16825 1174 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 RAD9BQ6WBX8 426 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZNF397Q8NF99 534 aaPredicted RBP19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GMLQ99445 158 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SH2D4AQ9H788 454 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GOPCQ9HD26 462 aa19.75■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PITPNM2Q9BZ72 1349 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 POTEMA6NI47 508 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 YDJCA8MPS7 323 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ARHGAP4P98171 946 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TBC1D8BQ0IIM8 1120 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CCDC65Q8IXS2 484 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 KIAA0895Q8NCT3 520 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 DDX12PQ92771 950 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZNHIT6Q9NWK9 470 aaKnown RBP19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ARFGEF1Q9Y6D6 1849 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EP400Q96L91 3159 aa19.74■□□□□ 0.75
HLA-DQB1-204ENST00000399084 URI1O94763 535 aaPredicted RBP19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GH2P01242 217 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PRKCSHP14314 528 aaPredicted RBP19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CREBRFQ8IUR6 639 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MNS1Q8NEH6 495 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CHURC1Q8WUH1 139 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CNOT6LQ96LI5 555 aaKnown RBP19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EDEM3Q9BZQ6 932 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TMX2Q9Y320 296 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MYH7BA7E2Y1 1941 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L15C9J2P7 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L13C9JLJ4 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L11C9JVI0 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L18D6R9N7 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L22D6RA61 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L17D6RBQ6 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L19D6RCP7 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L20D6RJB6 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 C21orf2O43822 256 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GNA14O95837 355 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZBED6P86452 979 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L24Q0WX57 530 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MEA1Q16626 185 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CCDC170Q8IYT3 715 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 NOC4LQ9BVI4 516 aaKnown RBP19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PCDHAC2Q9Y5I4 1007 aa19.73■□□□□ 0.75
HLA-DQB1-204ENST00000399084 FCER1AP12319 257 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 KRT83P78385 493 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ARHGAP29Q52LW3 1261 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MYOCDQ8IZQ8 938 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 UBXN4Q92575 508 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 DNAJC19Q96DA6 116 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SEMA6BQ9H3T3 888 aa19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZNF219Q9P2Y4 722 aaPredicted RBP19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ZNF70Q9UC06 446 aaPredicted RBP19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EPN1Q9Y6I3 576 aaPredicted RBP19.72■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TTC26A0AVF1 554 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 FAM196BA6NMK8 535 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 RAD21O60216 631 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 STAT2P52630 851 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 IKQ13123 557 aaPredicted RBP19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MAN2A1Q16706 1144 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 FAM160B2Q86V87 743 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 KIFC2Q96AC6 838 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CEP63Q96MT8 703 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 EHMT1Q9H9B1 1298 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SLC39A2Q9NP94 309 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 COBLO75128 1261 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GDF11O95390 407 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 RPA1P27694 616 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 FKBP3Q00688 224 aaKnown RBP19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 LARGE2Q8N3Y3 721 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ETNPPLQ8TBG4 499 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TTYH3Q9C0H2 523 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 HAUS4Q9H6D7 363 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GINM1Q9NU53 330 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PANK4Q9NVE7 773 aa19.71■□□□□ 0.75
HLA-DQB1-204ENST00000399084 IDEP14735 1019 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TRIM21P19474 475 aaKnown RBP19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MUTP22033 750 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 HNRNPH3P31942 346 aaKnown RBP19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CYLC1P35663 651 aaPredicted RBP19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MAP3K10Q02779 954 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms