RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HESX1Q9UBX0 185 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 KCNA4P22459 653 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 ATP11AP98196 1134 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 ARMCX5Q6P1M9 558 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 SRGAP1Q7Z6B7 1085 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 TMTC1Q8IUR5 882 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 XPAP23025 273 aaPredicted RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 RPS12P25398 132 aaKnown RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 ZNF34Q8IZ26 560 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 DISC1Q9NRI5 854 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 I3L4J1 428 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 GALNT17Q6IS24 598 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 TAOK1Q7L7X3 1001 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 IRAK4Q9NWZ3 460 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 ECE1P42892 770 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 MYOCDQ8IZQ8 938 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 PARD3BQ8TEW8 1205 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 ZNF215Q9UL58 517 aaPredicted RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 SUGT1Q9Y2Z0 365 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 TTC36A6NLP5 189 aa15.58■□□□□ 0.09
PCDHA11-201ENST00000398640 ZBTB33Q86T24 672 aa15.58■□□□□ 0.09
PCDHA11-201ENST00000398640 C10orf67Q8IYJ2 551 aa15.58■□□□□ 0.09
PCDHA11-201ENST00000398640 PGBD1Q96JS3 809 aa15.58■□□□□ 0.09
PCDHA11-201ENST00000398640 POLIQ9UNA4 740 aa15.58■□□□□ 0.09
PCDHA11-201ENST00000398640 USP17L10C9JJH3 530 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 INO80B-WBP1J3KQ70 363 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 SNAP25P60880 206 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 ADAT2Q7Z6V5 191 aaKnown RBP15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 FAM178BQ8IXR5 827 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 POMGNT1Q8WZA1 660 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 INO80BQ9C086 356 aaPredicted RBP15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 RAB20Q9NX57 234 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 PSMD14O00487 310 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 MARK3P27448 753 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 VPS41P49754 854 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 ZNF577Q9BSK1 485 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 C1orf112Q9NSG2 853 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 BUB1O43683 1085 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 SCG2P13521 617 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 SREBF2Q12772 1141 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 CFAP221Q4G0U5 840 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 LGSNQ5TDP6 509 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 ANKRD42Q8N9B4 389 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 ZFYVE28Q9HCC9 887 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 DEPDC5O75140 1603 aa15.58■□□□□ 0.08
PCDHA11-201ENST00000398640 SAT1P21673 171 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 PRDX5P30044 214 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 TTC31Q49AM3 519 aaPredicted RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 METTL23Q86XA0 190 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 PALM2Q8IXS6 379 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 RETREG2Q8NC44 543 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 IWS1Q96ST2 819 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 FBXO40Q9UH90 709 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 KCNH4Q9UQ05 1017 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 ZMYM6O95789 1325 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 KCNJ18B7U540 433 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 SLC4A1P02730 911 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 MCUR1Q96AQ8 359 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 CDHR1Q96JP9 859 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 GGA3Q9NZ52 723 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 NDUFAB1O14561 156 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 STAT1P42224 750 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 HUNKP57058 714 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 ANGEL2Q5VTE6 544 aaKnown RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 ERO1AQ96HE7 468 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 RILPQ96NA2 401 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 GSPT1P15170 499 aaKnown RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 SF3B3Q15393 1217 aaKnown RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 NEK8Q86SG6 692 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 HINFPQ9BQA5 517 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 SLC39A2Q9NP94 309 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 AMFRQ9UKV5 643 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 PFKFB1P16118 471 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 MORC3Q14149 939 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 TAF1CQ15572 869 aaPredicted RBP15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 CLIC6Q96NY7 704 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 RABGAP1Q9Y3P9 1069 aa15.57■□□□□ 0.08
PCDHA11-201ENST00000398640 GNA14O95837 355 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 MCAMP43121 646 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 LRCH2Q5VUJ6 765 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 KAZNQ674X7 775 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 KRT12Q99456 494 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 TYW5A2RUC4 315 aaKnown RBP15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 VSIG1Q86XK7 387 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 GYS1P13807 737 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 GANCQ8TET4 914 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 OSTNP61366 133 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms