RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 NAALADL2Q58DX5 795 aa6□□□□□ -1.45
VPS41-203ENST00000395969 FIGNQ5HY92 759 aa6□□□□□ -1.45
VPS41-203ENST00000395969 MAPKAPK5Q8IW41 473 aa6□□□□□ -1.45
VPS41-203ENST00000395969 ANKRD13AQ8IZ07 590 aa6□□□□□ -1.45
VPS41-203ENST00000395969 STAG2Q8N3U4 1231 aa6□□□□□ -1.45
VPS41-203ENST00000395969 SGSM3Q96HU1 749 aa6□□□□□ -1.45
VPS41-203ENST00000395969 PARD6BQ9BYG5 372 aa6□□□□□ -1.45
VPS41-203ENST00000395969 DONSONQ9NYP3 566 aa6□□□□□ -1.45
VPS41-203ENST00000395969 KCND2Q9NZV8 630 aa6□□□□□ -1.45
VPS41-203ENST00000395969 LIMA1Q9UHB6 759 aaKnown RBP6□□□□□ -1.45
VPS41-203ENST00000395969 RWDD2AQ9UIY3 292 aa6□□□□□ -1.45
VPS41-203ENST00000395969 MRFAP1Q9Y605 127 aa6□□□□□ -1.45
VPS41-203ENST00000395969 UBE4BO95155 1302 aa6□□□□□ -1.45
VPS41-203ENST00000395969 KLRC4O43908 158 aa6□□□□□ -1.45
VPS41-203ENST00000395969 NMT2O60551 498 aa6□□□□□ -1.45
VPS41-203ENST00000395969 LYPLA2O95372 231 aa6□□□□□ -1.45
VPS41-203ENST00000395969 DPEP1P16444 411 aa6□□□□□ -1.45
VPS41-203ENST00000395969 BMP6P22004 513 aa6□□□□□ -1.45
VPS41-203ENST00000395969 ME1P48163 572 aa6□□□□□ -1.45
VPS41-203ENST00000395969 SPIRE1Q08AE8 756 aa6□□□□□ -1.45
VPS41-203ENST00000395969 BRD3Q15059 726 aa6□□□□□ -1.45
VPS41-203ENST00000395969 LONRF2Q1L5Z9 754 aa6□□□□□ -1.45
VPS41-203ENST00000395969 BMT2Q1RMZ1 405 aa6□□□□□ -1.45
VPS41-203ENST00000395969 TKFCQ3LXA3 575 aa6□□□□□ -1.45
VPS41-203ENST00000395969 CFAP100Q494V2 611 aa6□□□□□ -1.45
VPS41-203ENST00000395969 CCDC91Q7Z6B0 441 aa6□□□□□ -1.45
VPS41-203ENST00000395969 NEK8Q86SG6 692 aa6□□□□□ -1.45
VPS41-203ENST00000395969 SLC51AQ86UW1 340 aa6□□□□□ -1.45
VPS41-203ENST00000395969 AOPEPQ8N6M6 819 aa6□□□□□ -1.45
VPS41-203ENST00000395969 PRPF38AQ8NAV1 312 aaKnown RBP6□□□□□ -1.45
VPS41-203ENST00000395969 PAGE5Q96GU1 130 aa6□□□□□ -1.45
VPS41-203ENST00000395969 FAM20AQ96MK3 541 aa6□□□□□ -1.45
VPS41-203ENST00000395969 DEF6Q9H4E7 631 aa6□□□□□ -1.45
VPS41-203ENST00000395969 FEM1BQ9UK73 627 aa6□□□□□ -1.45
VPS41-203ENST00000395969 A0A1B0GTH6 734 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 IRF6O14896 467 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 CTNND1O60716 968 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 SMC2O95347 1197 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 TNFAIP1Q13829 316 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 DCAF8Q5TAQ9 597 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 FOXR1Q6PIV2 292 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 MMS22LQ6ZRQ5 1243 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 GPIHBP1Q8IV16 184 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 ZSCAN29Q8IWY8 852 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 EFCAB13Q8IY85 973 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 ETNPPLQ8TBG4 499 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 XPO4Q9C0E2 1151 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 CSRNP2Q9H175 543 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 EPC1Q9H2F5 836 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 TSPYL2Q9H2G4 693 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 DISC1Q9NRI5 854 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 MAN1B1Q9UKM7 699 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 KDM3AQ9Y4C1 1321 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 VWA3AA6NCI4 1184 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 PPP1R3GB7ZBB8 358 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 KIF1CO43896 1103 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 URI1O94763 535 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 MAPTP10636 758 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 CAP2P40123 477 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 CDK17Q00537 523 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 LONRF3Q496Y0 759 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 DALRD3Q5D0E6 543 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 FAM47AQ5JRC9 791 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 ZNF658Q5TYW1 1059 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 SLFN12Q8IYM2 578 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 ADGRF4Q8IZF3 695 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 GIMAP8Q8ND71 665 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 NEK9Q8TD19 979 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 LENG9Q96B70 501 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 DHTKD1Q96HY7 919 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 MTRQ99707 1265 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 MMTAG2Q9BU76 263 aaKnown RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 MYL10Q9BUA6 226 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 POLR3CQ9BUI4 534 aaPredicted RBP5.99□□□□□ -1.45
VPS41-203ENST00000395969 CXorf56Q9H5V9 222 aa5.99□□□□□ -1.45
VPS41-203ENST00000395969 A0A087X0B3 334 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 A0A1W2PQC6 194 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PITPNM1O00562 1244 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 MEIS2O14770 477 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 OPLAHO14841 1288 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 WDR46O15213 610 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 NRDCO43847 1150 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 STAM2O75886 525 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 OR52Z1P0C646 297 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TXLNAP40222 546 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 ADCY7P51828 1080 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 MRPL12P52815 198 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 MYL5Q02045 173 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 NR5A1Q13285 461 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 PPP2R5CQ13362 524 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 CERKLQ49MI3 558 aaPredicted RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 BEND6Q5SZJ8 279 aaPredicted RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 LRRC31Q6UY01 552 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 RPAINQ86UA6 219 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 APOBEC3FQ8IUX4 373 aaKnown RBP5.98□□□□□ -1.45
VPS41-203ENST00000395969 EXOC8Q8IYI6 725 aa5.98□□□□□ -1.45
VPS41-203ENST00000395969 REPS2Q8NFH8 660 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms