RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZNF710Q8N1W2 664 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 CSGALNACT2Q8N6G5 542 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 P2RX5Q93086 422 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 PPP2R2CQ9Y2T4 447 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 FANCGO15287 622 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
GPC3-202ENST00000394299 ERCC3P19447 782 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 CAP2P40123 477 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 KCNJ6P48051 423 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 UBXN2AP68543 259 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 ZBED3Q96IU2 234 aaPredicted RBP16.86■□□□□ 0.29
GPC3-202ENST00000394299 TAOK3Q9H2K8 898 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 STK17AQ9UEE5 414 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 PAXBP1Q9Y5B6 917 aa16.86■□□□□ 0.29
GPC3-202ENST00000394299 SPDYE3A6NKU9 549 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 STX10O60499 249 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 MED24O75448 989 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 CFBP00751 764 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 CCNE1P24864 410 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 RASA3Q14644 834 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 RAD9BQ6WBX8 426 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 SAMD7Q7Z3H4 446 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 LENG9Q96B70 501 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 PKNOX2Q96KN3 472 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 TBC1D7Q9P0N9 293 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 CYP3A7-CYP3A51PA0A087WV96 503 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 MEIS1O00470 390 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 CYP3A7P24462 503 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 TRIM65Q6PJ69 517 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 DHTKD1Q96HY7 919 aaPredicted RBP16.85■□□□□ 0.29
GPC3-202ENST00000394299 FGFBP2Q9BYJ0 223 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 GLT8D2Q9H1C3 349 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
GPC3-202ENST00000394299 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
GPC3-202ENST00000394299 MFAP3LO75121 409 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 TGFB2P61812 414 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 AP3B2Q13367 1082 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 UNC13DQ70J99 1090 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 ETNPPLQ8TBG4 499 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
GPC3-202ENST00000394299 POLD4Q9HCU8 107 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 PSME4Q14997 1843 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 B4DLN1 442 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 MMP14P50281 582 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 PRELPP51888 382 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 PSMC6P62333 389 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 SPAG1Q07617 926 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 DNAI1Q9UI46 699 aa16.84■□□□□ 0.29
GPC3-202ENST00000394299 ARFGEF1Q9Y6D6 1849 aa16.83■□□□□ 0.29
GPC3-202ENST00000394299 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 KLK7P49862 253 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 RASSF7Q02833 373 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 NCAPH2Q6IBW4 605 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 POTEGQ6S5H5 508 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 THAP9Q9H5L6 903 aa16.83■□□□□ 0.28
GPC3-202ENST00000394299 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.83■□□□□ 0.281e-56■□□□□ 8.2
GPC3-202ENST00000394299 V9GYY5 206 aaPredicted RBP16.83■□□□□ 0.28
GPC3-202ENST00000394299 MSH4O15457 936 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 INPP5BP32019 993 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 SREBF1P36956 1147 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 MB21D1Q8N884 522 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 PANX2Q96RD6 677 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 CTIFO43310 598 aaKnown RBP16.82■□□□□ 0.28
GPC3-202ENST00000394299 TBC1D12O60347 775 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 TBC1D10BQ4KMP7 808 aaPredicted RBP16.82■□□□□ 0.28
GPC3-202ENST00000394299 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 IRX2Q9BZI1 471 aaPredicted RBP16.82■□□□□ 0.28
GPC3-202ENST00000394299 VPS33BQ9H267 617 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
GPC3-202ENST00000394299 FZD1Q9UP38 647 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 GJA3Q9Y6H8 435 aa16.82■□□□□ 0.28
GPC3-202ENST00000394299 PVALEFA0A1B0GWK0 134 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 PHF20L1A8MW92 1017 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 PLA2G4BP0C869 781 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 R3HDM1Q15032 1099 aaKnown RBP16.81■□□□□ 0.28
GPC3-202ENST00000394299 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 CNOT6LQ96LI5 555 aaKnown RBP16.81■□□□□ 0.28
GPC3-202ENST00000394299 ARID3AQ99856 593 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 ZNF341Q9BYN7 854 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 MAGEC2Q9UBF1 373 aaPredicted RBP16.81■□□□□ 0.28
GPC3-202ENST00000394299 ZNF76P36508 570 aa16.81■□□□□ 0.28
GPC3-202ENST00000394299 ETF1P62495 437 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms