RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IRF6O14896 467 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.85
TDP1-203ENST00000393454 TPM4P67936 248 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 RNF207Q6ZRF8 634 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 PLA2G4DQ86XP0 818 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 FAM20AQ96MK3 541 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 GSDMAQ96QA5 445 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 MTRQ99707 1265 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 BPIFA3Q9BQP9 254 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 CUEDC2Q9H467 287 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 DACH1Q9UI36 760 aa9.71□□□□□ -0.85
TDP1-203ENST00000393454 SPDYE5A6NIY4 337 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 TRAF5O00463 557 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 TBX3O15119 743 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 MSH4O15457 936 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 AP5Z1O43299 807 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 PTMAP06454 111 aaKnown RBP9.71□□□□□ -0.86
TDP1-203ENST00000393454 BMP6P22004 513 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 STAT3P40763 770 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 RPS6P62753 249 aaKnown RBP9.71□□□□□ -0.86
TDP1-203ENST00000393454 GRB10Q13322 594 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 TMEM132BQ14DG7 1078 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 NCAPH2Q6IBW4 605 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 SPATA20Q8TB22 786 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 ETNPPLQ8TBG4 499 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 SYTL5Q8TDW5 730 aaPredicted RBP9.71□□□□□ -0.86
TDP1-203ENST00000393454 LENG9Q96B70 501 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 TRIM5Q9C035 493 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 COL20A1Q9P218 1284 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 RIPK3Q9Y572 518 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 RLFQ13129 1914 aa9.71□□□□□ -0.86
TDP1-203ENST00000393454 PTPRFP10586 1907 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 CXCL11O14625 94 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 RPN1P04843 607 aaKnown RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 OAZ1P54368 228 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 AMPD3Q01432 767 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.86
TDP1-203ENST00000393454 PPIL2Q13356 520 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 CEP55Q53EZ4 464 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 SLC30A10Q6XR72 485 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 LRRC15Q8TF66 581 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 OPTNQ96CV9 577 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 PDLIM2Q96JY6 352 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 TAAR1Q96RJ0 339 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 MAGEF1Q9HAY2 307 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 KBTBD4Q9NVX7 518 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 RMND1Q9NWS8 449 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 MAP3K20Q9NYL2 800 aaKnown RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 ADAMTS5Q9UNA0 930 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 RABGAP1Q9Y3P9 1069 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 MYPNQ86TC9 1320 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 IGLV3-22A0A075B6J6 115 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 A0A0G2JLL6 359 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 EIF2AK2P19525 551 aaKnown RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 IRX3P78415 501 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 BAATQ14032 418 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 ARHGEF16Q5VV41 709 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 PRRT2Q7Z6L0 340 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 PIAS4Q8N2W9 510 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 PROCA1Q8NCQ7 364 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 RMDN3Q96TC7 470 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
TDP1-203ENST00000393454 ZNF214Q9UL59 606 aaPredicted RBP9.7□□□□□ -0.86
TDP1-203ENST00000393454 KDM3AQ9Y4C1 1321 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 IKBKBO14920 756 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 MYL1P05976 194 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 MYCLP12524 364 aaPredicted RBP9.69□□□□□ -0.86
TDP1-203ENST00000393454 ASIC1P78348 528 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 MYL5Q02045 173 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 MCM6Q14566 821 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 ECM1Q16610 540 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 LRCH2Q5VUJ6 765 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 DRC7Q8IY82 874 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 SMYD4Q8IYR2 804 aaPredicted RBP9.69□□□□□ -0.86
TDP1-203ENST00000393454 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
TDP1-203ENST00000393454 RAD54LQ92698 747 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 CCDC47Q96A33 483 aaKnown RBP9.69□□□□□ -0.86
TDP1-203ENST00000393454 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 NT5C3AQ9H0P0 336 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 KIAA1024Q9UPX6 916 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
TDP1-203ENST00000393454 MEIS1O00470 390 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 ATP2A1O14983 1001 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 CHMP2AO43633 222 aa9.68□□□□□ -0.86
TDP1-203ENST00000393454 GAS7O60861 476 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms