RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CLIC6Q96NY7 704 aa2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 ACBD3Q9H3P7 528 aa2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 EPB41L1Q9H4G0 881 aa2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 RXFP1Q9HBX9 757 aa2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 PRKAG3Q9UGI9 489 aa2.13□□□□□ -2.07
SNORD28B-201ENST00000390993 U2SURPO15042 1029 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 SMAD7O15105 426 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 PLA2G1BP04054 148 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 CYP1A1P04798 512 aaPredicted RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 TCF3P15923 654 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 FBLN1P23142 703 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 RPL13P26373 211 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 CNR2P34972 360 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 MC3RP41968 323 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 CEBPAP49715 358 aaPredicted RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 HTRA3P83110 453 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 LSAMPQ13449 338 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 SMAD4Q13485 552 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 ZNF568Q3ZCX4 644 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 FAM26FQ5R3K3 315 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 GLB1LQ6UWU2 654 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 EP400NLQ6ZTU2 488 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 FAM126BQ8IXS8 530 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 PPIL6Q8IXY8 311 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 BTN2A2Q8WVV5 523 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 COPS5Q92905 334 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 LCORQ96JN0 433 aaPredicted RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 IPO9Q96P70 1041 aaKnown RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 TMEM209Q96SK2 561 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 MTA3Q9BTC8 594 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 MCMBPQ9BTE3 642 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 KRTAP4-9Q9BYQ8 210 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 ADAM7Q9H2U9 754 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 L2HGDHQ9H9P8 463 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 GPRC5CQ9NQ84 441 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 CLDND1Q9NY35 253 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 APEX2Q9UBZ4 518 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 PPP1R1BQ9UD71 204 aaPredicted RBP2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 PCDHB4Q9Y5E5 795 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 HCFC2Q9Y5Z7 792 aa2.12□□□□□ -2.07
SNORD28B-201ENST00000390993 MROH6A6NGR9 719 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 C9orf118A6NHY6 69 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 SUSD5O60279 629 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ITGAVP06756 1048 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 NAT1P18440 290 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 THBS2P35442 1172 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 BCL6P41182 706 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 HSP90AA2PQ14568 343 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 RTP5Q14D33 572 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ZXDCQ2QGD7 858 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 SKOR2Q2VWA4 1001 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 VWA3BQ502W6 1294 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 LCE4AQ5TA78 99 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 STEAP3Q658P3 488 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 CYP4F22Q6NT55 531 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 C6orf15Q6UXA7 325 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 RSPO2Q6UXX9 243 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ZNF227Q86WZ6 799 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 MIB1Q86YT6 1006 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 TP53I13Q8NBR0 393 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 PLEKHO2Q8TD55 490 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ADAMTS17Q8TE56 1095 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ZNF526Q8TF50 670 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 FRS2Q8WU20 508 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 DDX1Q92499 740 aaKnown RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 KISS1RQ969F8 398 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 TOE1Q96GM8 510 aaKnown RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 LOXL4Q96JB6 756 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 MRGPRX3Q96LB0 322 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 CDK5RAP1Q96SZ6 601 aaKnown RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 C11orf84Q9BUA3 381 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 TRIM55Q9BYV6 548 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 TMEM168Q9H0V1 697 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 BCAS3Q9H6U6 928 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 BARX1Q9HBU1 254 aaPredicted RBP2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 JADE2Q9NQC1 790 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 SMPD4Q9NXE4 827 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 FTSJ1Q9UET6 329 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 ZNF652Q9Y2D9 606 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 MYRFQ9Y2G1 1151 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 PCDHA2Q9Y5H9 948 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 MRVI1Q9Y6F6 885 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 X6R8D5 127 aa2.11□□□□□ -2.07
SNORD28B-201ENST00000390993 A0A1B0GTL3 188 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 SGSM2O43147 1006 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 NOBOXO60393 691 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 FBXO21O94952 628 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 PLATP00750 562 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 SCG5P05408 212 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 C8BP07358 591 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 FPR2P25090 351 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 DNAJA1P31689 397 aaKnown RBP2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 SPIRE1Q08AE8 756 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 EFEMP1Q12805 493 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 MAP4K2Q12851 820 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 RGL3Q3MIN7 710 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 HS1BP3Q53T59 392 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 MCTP2Q6DN12 878 aa2.1□□□□□ -2.07
SNORD28B-201ENST00000390993 VASNQ6EMK4 673 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms