RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 WDR18Q9BV38 432 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
LTN1-203ENST00000389195 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 MSH4O15457 936 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 ASNSP08243 561 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 PAK1Q13153 545 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 CTTNQ14247 550 aaKnown RBP11.39□□□□□ -0.59
LTN1-203ENST00000389195 ZNF658Q5TYW1 1059 aaPredicted RBP11.39□□□□□ -0.59
LTN1-203ENST00000389195 ANKRD40Q6AI12 368 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 MAEAQ7L5Y9 396 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.39□□□□□ -0.59
LTN1-203ENST00000389195 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 CALML4Q96GE6 196 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 ADM5C9JUS6 153 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 ARP10275 920 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 YBX3P16989 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
LTN1-203ENST00000389195 PRPHP41219 470 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 ZNF280AP59817 542 aaPredicted RBP11.38□□□□□ -0.59
LTN1-203ENST00000389195 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
LTN1-203ENST00000389195 NAA30Q147X3 362 aaPredicted RBP11.38□□□□□ -0.59
LTN1-203ENST00000389195 KRT31Q15323 416 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 SPATA1Q5VX52 437 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 KRT79Q5XKE5 535 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 NELFCDQ8IXH7 590 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 LARP4BQ92615 738 aaKnown RBP11.38□□□□□ -0.59
LTN1-203ENST00000389195 R3HDMLQ9H3Y0 253 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 TELO2Q9Y4R8 837 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 CD2APQ9Y5K6 639 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 ZNF536O15090 1300 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 TMEM150BA6NC51 233 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
LTN1-203ENST00000389195 NT5C2P49902 561 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 TMEM266Q2M3C6 531 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 CATSPER3Q86XQ3 398 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 VSTM4Q8IW00 320 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
LTN1-203ENST00000389195 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 VCAM1P19320 739 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 RBL2Q08999 1139 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 E4F1Q66K89 784 aaPredicted RBP11.37□□□□□ -0.59
LTN1-203ENST00000389195 PPP4R3AQ6IN85 833 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 KSR1Q8IVT5 923 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
LTN1-203ENST00000389195 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 H7C1D1 291 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 LAD1O00515 517 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 N4BP3O15049 544 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 CDC25BP30305 580 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 NR1I3Q14994 352 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 ADSSL1Q8N142 457 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 ETNPPLQ8TBG4 499 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 ATG4CQ96DT6 458 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 EXOC1Q9NV70 894 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 RNF181Q9P0P0 153 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 TFR2Q9UP52 801 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 KCNJ18B7U540 433 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 EIF2AK2P19525 551 aaKnown RBP11.37□□□□□ -0.59
LTN1-203ENST00000389195 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
LTN1-203ENST00000389195 SP4Q02446 784 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 KCNJ12Q14500 433 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 PLS1Q14651 629 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 NSMFQ6X4W1 530 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 CCDC34Q96HJ3 373 aa11.37□□□□□ -0.59
LTN1-203ENST00000389195 WRAP73Q9P2S5 460 aaPredicted RBP11.37□□□□□ -0.59
LTN1-203ENST00000389195 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 ABL1P00519 1130 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 ERCC5P28715 1186 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 CASP14P31944 242 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
LTN1-203ENST00000389195 CASP5P51878 434 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 APBA1Q02410 837 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 SPIRE1Q08AE8 756 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 KCNA1Q09470 495 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 BTNL9Q6UXG8 535 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 RAD54LQ92698 747 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 DUSP9Q99956 384 aaKnown RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 KCNMB3Q9NPA1 279 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 GPRC5DQ9NZD1 345 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 ADD3Q9UEY8 706 aaKnown RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 PSME4Q14997 1843 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 LAMA2P24043 3122 aaKnown RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 B4DLN1 442 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms