RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 NSUN2Q08J23 767 aaKnown RBP eCLIP16.85■□□□□ 0.29
ALK-201ENST00000389048 GNPTABQ3T906 1256 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 IP6K1Q92551 441 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 CALN1Q9BXU9 219 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 ZWILCHQ9H900 591 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
ALK-201ENST00000389048 NOVA2Q9UNW9 492 aaKnown RBP16.85■□□□□ 0.29
ALK-201ENST00000389048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.29
ALK-201ENST00000389048 XPAP23025 273 aaPredicted RBP16.85■□□□□ 0.29
ALK-201ENST00000389048 ART3Q13508 389 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 C10orf76Q5T2E6 689 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 EEPD1Q7L9B9 569 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 TESK2Q96S53 571 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 CTSWP56202 376 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 YWHAHQ04917 246 aaPredicted RBP16.85■□□□□ 0.29
ALK-201ENST00000389048 ANO4Q32M45 955 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 NBPF3Q9H094 633 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
ALK-201ENST00000389048 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
ALK-201ENST00000389048 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 NXF1Q9UBU9 619 aaKnown RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 POLR3AO14802 1390 aaPredicted RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 SCG2P13521 617 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 NUDCD3Q8IVD9 361 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 KRT27Q7Z3Y8 459 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 MTRQ99707 1265 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
ALK-201ENST00000389048 MTMR6Q9Y217 621 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 SPATA1Q5VX52 437 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 MAP3K7O43318 606 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 EVI5O60447 810 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 TCP1P17987 556 aaKnown RBP16.84■□□□□ 0.29
ALK-201ENST00000389048 SUPT20HQ8NEM7 779 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 CEP70Q8NHQ1 597 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 SMYD3Q9H7B4 428 aa16.84■□□□□ 0.29
ALK-201ENST00000389048 H3BRJ5 948 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 NNTQ13423 1086 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 RSRC2Q7L4I2 434 aaKnown RBP16.83■□□□□ 0.29
ALK-201ENST00000389048 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 TRIM59Q8IWR1 403 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 UBE2TQ9NPD8 197 aaPredicted RBP16.83■□□□□ 0.29
ALK-201ENST00000389048 hCG_2014768A0A024R1R8 64 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.29
ALK-201ENST00000389048 SOX5P35711 763 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 THOC5Q13769 683 aaKnown RBP16.83■□□□□ 0.29
ALK-201ENST00000389048 RPS6KC1Q96S38 1066 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 CAPN11Q9UMQ6 739 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 CSADQ9Y600 493 aa16.83■□□□□ 0.29
ALK-201ENST00000389048 H0Y3Z8 333 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 M0R2C6 588 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 MYO1FO00160 1098 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 NR2F2P24468 414 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 MFAP3P55082 362 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 DHX9Q08211 1270 aaKnown RBP16.83■□□□□ 0.28
ALK-201ENST00000389048 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 RFX8Q6ZV50 586 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 KLHL29Q96CT2 875 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 H7C1D1 291 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 NOP14P78316 857 aaKnown RBP16.83■□□□□ 0.28
ALK-201ENST00000389048 KRT80Q6KB66 452 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 DDIT3P35638 169 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 PTK2Q05397 1052 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 FAM26FQ5R3K3 315 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 GINM1Q9NU53 330 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 ADCY9O60503 1353 aa16.83■□□□□ 0.28
ALK-201ENST00000389048 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 ADORA1P30542 326 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 ETF1P62495 437 aaKnown RBP16.82■□□□□ 0.28
ALK-201ENST00000389048 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 ACSL3O95573 720 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 PFDN6O15212 129 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 PPP2R5EQ16537 467 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 ARHGEF18Q6ZSZ5 1173 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 TRIM67Q6ZTA4 783 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 TRPM2O94759 1503 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 ADCK5Q3MIX3 580 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
ALK-201ENST00000389048 BEGAINQ9BUH8 593 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms