RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 ZBED4O75132 1171 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 HARSP12081 509 aaKnown RBP13.84□□□□□ -0.19
CDX2-201ENST00000381020 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
CDX2-201ENST00000381020 FKBP3Q00688 224 aaKnown RBP13.84□□□□□ -0.19
CDX2-201ENST00000381020 MIER3Q7Z3K6 550 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 CERS5Q8N5B7 392 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 SECISBP2LQ93073 1101 aaKnown RBP13.84□□□□□ -0.19
CDX2-201ENST00000381020 CCSER1Q9C0I3 900 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 RHBDL3P58872 404 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 ZNF577Q9BSK1 485 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
CDX2-201ENST00000381020 BUB1O43683 1085 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 PRPF6O94906 941 aaKnown RBP13.83□□□□□ -0.2
CDX2-201ENST00000381020 XRCC5P13010 732 aaKnown RBP13.83□□□□□ -0.2
CDX2-201ENST00000381020 MB21D1Q8N884 522 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 SCLT1Q96NL6 688 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 SLC37A4O43826 429 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
CDX2-201ENST00000381020 MYL1P05976 194 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 MAP9Q49MG5 647 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 BMP6P22004 513 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
CDX2-201ENST00000381020 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
CDX2-201ENST00000381020 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 SFMBT2Q5VUG0 894 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 NDST4Q9H3R1 872 aa13.83□□□□□ -0.2
CDX2-201ENST00000381020 ATRNO75882 1429 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 EIF2AK2P19525 551 aaKnown RBP13.82□□□□□ -0.2
CDX2-201ENST00000381020 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 TMEM110-MUSTN1A8MSY1 372 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 HOXA10P31260 410 aaPredicted RBP13.82□□□□□ -0.2
CDX2-201ENST00000381020 ASIC2Q16515 512 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 UNC13DQ70J99 1090 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 FUT2Q10981 343 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 SLC15A2Q16348 729 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 DALRD3Q5D0E6 543 aaKnown RBP13.82□□□□□ -0.2
CDX2-201ENST00000381020 TMEM39BQ9GZU3 492 aa13.82□□□□□ -0.2
CDX2-201ENST00000381020 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
CDX2-201ENST00000381020 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDX2-201ENST00000381020 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
CDX2-201ENST00000381020 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 THAP9Q9H5L6 903 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
CDX2-201ENST00000381020 PSMD14O00487 310 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 NDUFA10O95299 355 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 MAN2A1Q16706 1144 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ARHGEF16Q5VV41 709 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 PRAMEF18Q5VWM3 479 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 TC2NQ8N9U0 490 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 RAD54LQ92698 747 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 CHP1Q99653 195 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ABCC6O95255 1503 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ROBO1Q9Y6N7 1651 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 A0A1B0GTH6 734 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 MYMKA6NI61 221 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ASNSP08243 561 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ECE1P42892 770 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 NR1I3Q14994 352 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 WDR24Q96S15 920 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
CDX2-201ENST00000381020 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 TEKT3Q9BXF9 490 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 SAR1BQ9Y6B6 198 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 PRPHP41219 470 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
CDX2-201ENST00000381020 LEKR1Q6ZMV7 388 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 NLRX1Q86UT6 975 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 IFT81Q8WYA0 676 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 SHMT1P34896 483 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 RASSF7Q02833 373 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms