RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 ZNF148Q9UQR1 794 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 HIPK4Q8NE63 616 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 TRPC1P48995 793 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 UTP6Q9NYH9 597 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■□□□□ 10.6
CCDC85C-201ENST00000380243 KRT81Q14533 505 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 EXOC3L4Q17RC7 722 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ARHGAP22Q7Z5H3 698 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 TTC1Q99614 292 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CA4P22748 312 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PDE1BQ01064 536 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 OLFML2BQ68BL8 750 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 SNRNP27Q8WVK2 155 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 NOD2Q9HC29 1040 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 TMCC1O94876 653 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 SIKE1Q9BRV8 207 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 SGO2Q562F6 1265 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PAGE5Q96GU1 130 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 USP40Q9NVE5 1235 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 GCNT3O95395 438 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 S100BP04271 92 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 KRT8P05787 483 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 MYL1P05976 194 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ACADSP16219 412 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CATSPER2Q96P56 530 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CNGA3Q16281 694 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ASCC2Q9H1I8 757 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CHMP2AO43633 222 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 PALMO75781 387 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 STAM2O75886 525 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ARHGAP44Q17R89 818 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 TRPM8Q7Z2W7 1104 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 CEP19Q96LK0 163 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
CCDC85C-201ENST00000380243 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 ADAM9Q13443 819 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 SLC39A2Q9NP94 309 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 KAZNQ674X7 775 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 PALM3A6NDB9 673 aaPredicted RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 WARS2Q9UGM6 360 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 SERPINB10P48595 397 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 CCDC15Q0P6D6 951 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 SCG2P13521 617 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 MAD1L1Q9Y6D9 718 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 HAUS5O94927 633 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 MRPS15P82914 257 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 MRPL40Q9NQ50 206 aaKnown RBP11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 CTDSPL2Q05D32 466 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 RESTQ13127 1097 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 HDAC4P56524 1084 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 GPBP1Q86WP2 473 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 EYA2O00167 538 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
CCDC85C-201ENST00000380243 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 ADCK5Q3MIX3 580 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 PAPOLBQ9NRJ5 636 aaKnown RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 NSFP46459 744 aaKnown RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 RASSF3Q86WH2 238 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 H2AFXP16104 143 aaPredicted RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 MARK3P27448 753 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 PLA2G4AP47712 749 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 SMYD4Q8IYR2 804 aaPredicted RBP11.31□□□□□ -0.6
CCDC85C-201ENST00000380243 PPIP5K1Q6PFW1 1433 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms