RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TTC39AQ5SRH9 613 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 OR52E8Q6IFG1 317 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 EMBQ6PCB8 327 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 C16orf87Q6PH81 154 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 EXOC3L1Q86VI1 746 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ZBTB8BQ8NAP8 495 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 APPBP2Q92624 585 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CAVIN3Q969G5 261 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TEKT1Q969V4 418 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ANKRD27Q96NW4 1050 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 IWS1Q96ST2 819 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SLF1Q9BQI6 1058 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 UBA5Q9GZZ9 404 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TRIM10Q9UDY6 481 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 LOC102724428A0A0B4J2F2 783 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 A8MUI8 341 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PSMD14O00487 310 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF18P17022 549 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SIK1P57059 783 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 KCNJ2P63252 427 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CKAP4Q07065 602 aaKnown RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PDE4BQ07343 736 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 LONRF3Q496Y0 759 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 FKBP15Q5T1M5 1219 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PAPD7Q5XG87 772 aaKnown RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 HOOK3Q86VS8 718 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ATP11CQ8NB49 1132 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 FBXO41Q8TF61 875 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TRAPPC9Q96Q05 1148 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 BOLA2Q9H3K6 86 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SLC12A6Q9UHW9 1150 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 BARX2Q9UMQ3 279 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CEP131Q9UPN4 1083 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TAF6LQ9Y6J9 622 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 BRWD3Q6RI45 1802 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 IPO5O00410 1097 aaKnown RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 IRS4O14654 1257 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SLC5A1P13866 664 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CDC27P30260 824 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 HPDP32754 393 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 USP46P62068 366 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 SLC4A8Q2Y0W8 1093 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 GKAP1Q5VSY0 366 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 NAA16Q6N069 864 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CPLX3Q8WVH0 158 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 DYDC1Q8WWB3 177 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF274Q96GC6 653 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 MOV10L1Q9BXT6 1211 aaKnown RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF185O15231 689 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 PDE8BO95263 885 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 PHEXP78562 749 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 NR1I3Q14994 352 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 SF3B3Q15393 1217 aaKnown RBP8.21□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC92Q53HC0 331 aaPredicted RBP8.21□□□□□ -1.09
CDKL5-201ENST00000379989 PI16Q6UXB8 463 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 NCCRP1Q6ZVX7 275 aaPredicted RBP8.21□□□□□ -1.09
CDKL5-201ENST00000379989 LMNTD2Q8IXW0 634 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 EXOC8Q8IYI6 725 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 OGFOD1Q8N543 542 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 GBP7Q8N8V2 638 aaPredicted RBP8.21□□□□□ -1.09
CDKL5-201ENST00000379989 AIDAQ96BJ3 306 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC43Q96MW1 224 aaKnown RBP8.21□□□□□ -1.09
CDKL5-201ENST00000379989 NEK1Q96PY6 1258 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 LRRC1Q9BTT6 524 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 PCDH18Q9HCL0 1135 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 AGAP1Q9UPQ3 857 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 LRRC42Q9Y546 428 aa8.21□□□□□ -1.09
CDKL5-201ENST00000379989 MFAP3LO75121 409 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 TMCC1O94876 653 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 NQO1P15559 274 aaKnown RBP8.21□□□□□ -1.1
CDKL5-201ENST00000379989 CA8P35219 290 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 ERVK-24P63145 666 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 MRPS25P82663 173 aaKnown RBP8.21□□□□□ -1.1
CDKL5-201ENST00000379989 INTS5Q6P9B9 1019 aaKnown RBP8.21□□□□□ -1.1
CDKL5-201ENST00000379989 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
CDKL5-201ENST00000379989 CD302Q8IX05 232 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 TRMT112Q9UI30 125 aaKnown RBP8.21□□□□□ -1.1
CDKL5-201ENST00000379989 GUCA1BQ9UMX6 200 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 TIAM2Q8IVF5 1701 aa8.21□□□□□ -1.1
CDKL5-201ENST00000379989 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 HMGB1P1B2RPK0 211 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 TEX33O43247 280 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 CEP104O60308 925 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 FECHP22830 423 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 IFI16Q16666 785 aaKnown RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 APBB1IPQ7Z5R6 666 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 VGLL2Q8N8G2 317 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 LINC00301Q8NCQ3 95 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 C1orf131Q8NDD1 294 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms