RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TTC19Q6DKK2 380 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-202ENST00000378182 OR6B2Q6IFH4 312 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 IFT122Q9HBG6 1241 aa15.33■□□□□ 0.04
TRIM13-202ENST00000378182 RPN1P04843 607 aaKnown RBP15.32■□□□□ 0.04
TRIM13-202ENST00000378182 SCG2P13521 617 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 EEF1GP26641 437 aaKnown RBP15.32■□□□□ 0.04
TRIM13-202ENST00000378182 UBE2SQ16763 222 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 MUM1Q2TAK8 710 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 PGBD3Q8N328 593 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 MFAP3P55082 362 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 FRA10AC1Q70Z53 315 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 ATP6V0A1Q93050 837 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 MAP3K7O43318 606 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 OCM2P0CE71 109 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 OCMP0CE72 109 aaPredicted RBP15.32■□□□□ 0.04
TRIM13-202ENST00000378182 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 TMTC1Q8IUR5 882 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 THEM5Q8N1Q8 247 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 SRP68Q9UHB9 627 aaKnown RBP15.32■□□□□ 0.04
TRIM13-202ENST00000378182 GOLGA8IPA6NC78 632 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 GOLGA8JA6NMD2 632 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 OR6B3Q8NGW1 331 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 SEC31BQ9NQW1 1179 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 GPC4O75487 556 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 PHKA1P46020 1223 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 TSNAXIP1Q2TAA8 658 aa15.32■□□□□ 0.04
TRIM13-202ENST00000378182 MAPK4P31152 587 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ATP1A2P50993 1020 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 URGCPQ8TCY9 931 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 COG4Q9H9E3 785 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 PSDA5PKW4 1024 aaPredicted RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SEC24BO95487 1268 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ARHGEF18Q6ZSZ5 1173 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 EIF2AK2P19525 551 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ELF2Q15723 593 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SARS2Q9NP81 518 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ARHGAP6O43182 974 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 TTC4O95801 387 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 MYL1P05976 194 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 CACNB3P54284 484 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 RASSF7Q02833 373 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 PTGDRQ13258 359 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 EXOC3L4Q17RC7 722 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 XAB2Q9HCS7 855 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ORC6Q9Y5N6 252 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SNX21Q969T3 373 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 RECQLP46063 649 aaPredicted RBP15.31■□□□□ 0.04
TRIM13-202ENST00000378182 MTMR3Q13615 1198 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 SNX19Q92543 992 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 AMNQ9BXJ7 453 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
TRIM13-202ENST00000378182 PHKG2P15735 406 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 ASPHQ12797 758 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 RAET1EQ8TD07 263 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 FAM95CA0A1B0GW59 222 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 CCDC84Q86UT8 332 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 NT5C1BQ96P26 610 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 MAP7D3Q8IWC1 876 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 KRT82Q9NSB4 513 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 AFF4Q9UHB7 1163 aaKnown RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 MED23Q9ULK4 1368 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 CLCA2Q9UQC9 943 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 YEATS2Q9ULM3 1422 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 ARL4AP40617 200 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 KCNA1Q09470 495 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 TWF2Q6IBS0 349 aaKnown RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 SLC4A7Q9Y6M7 1214 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 AOC3Q16853 763 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 CABS1Q96KC9 395 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 NR1H4Q96RI1 486 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-202ENST00000378182 VCX3AQ9NNX9 186 aa15.3■□□□□ 0.04
TRIM13-202ENST00000378182 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms