RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 KIAA1841Q6NSI8 718 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 CFAP36Q96G28 342 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 MYO1FO00160 1098 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 MSH2P43246 934 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 IFT88Q13099 833 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 SGO2Q562F6 1265 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 NUDCD3Q8IVD9 361 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 PDE11AQ9HCR9 933 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ADCY9O60503 1353 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 TRPA1O75762 1119 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 PPARGP37231 505 aaPredicted RBP13.5□□□□□ -0.25
VPS13A-204ENST00000376634 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
VPS13A-204ENST00000376634 IP6K1Q92551 441 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ADAM9Q13443 819 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 BCAS4Q8TDM0 211 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ARHGEF37A1IGU5 675 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 HOXB7P09629 217 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 TBCCQ15814 346 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 FAM47AQ5JRC9 791 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 PPP4R4Q6NUP7 873 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 C1orf228Q6PIY5 440 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 FAM95CA0A1B0GW59 222 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 IGBP1P78318 339 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 THOC5Q13769 683 aaKnown RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 TMED2Q15363 201 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 APOL6Q9BWW8 343 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 BABAM1Q9NWV8 329 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 GCKRQ14397 625 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 PAWRQ96IZ0 340 aaKnown RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 GADD45BO75293 160 aaPredicted RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 TOM1L1O75674 476 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 MAPK4P31152 587 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 FRA10AC1Q70Z53 315 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 LZICQ8WZA0 190 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 RASSF7Q02833 373 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 EXOC8Q8IYI6 725 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ITM2BQ9Y287 266 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
VPS13A-204ENST00000376634 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
VPS13A-204ENST00000376634 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 LAD1O00515 517 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 PCYT1AP49585 367 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 JAK2O60674 1132 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 DDAH1O94760 285 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 HOXC9P31274 260 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 NEUROG2Q9H2A3 272 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 ICA1Q05084 483 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 DHX38Q92620 1227 aaKnown RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 E9PMD0 336 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 CDC26Q8NHZ8 85 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 GJA10Q969M2 543 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 NT5C1BQ96P26 610 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 SLC39A2Q9NP94 309 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 SCG2P13521 617 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
VPS13A-204ENST00000376634 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
VPS13A-204ENST00000376634 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.255e-9■■■□□ 17.4
VPS13A-204ENST00000376634 OCM2P0CE71 109 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms