RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 HYOU1Q9Y4L1 999 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 ARHGAP24Q8N264 748 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 P3H4Q92791 437 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 ZNF589Q86UQ0 364 aaPredicted RBP16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 RNF8O76064 485 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 CACNB3P54284 484 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 UNC5CLQ8IV45 518 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 TRIM58Q8NG06 486 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 TSKSQ9UJT2 592 aa16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 TPX2Q9ULW0 747 aaKnown RBP16.02■□□□□ 0.15
NOTCH4-201ENST00000375023 PDIA3P30101 505 aaKnown RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 NFX1Q12986 1120 aaKnown RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 MYRIPQ8NFW9 859 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 GPT2Q8TD30 523 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 NRBP2Q9NSY0 501 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 TUBBP07437 444 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 PDE1BQ01064 536 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 CCDC38Q502W7 563 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 GDAP1Q8TB36 358 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 GFPT2O94808 682 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 LIG3P49916 1009 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 MAIP1Q8WWC4 291 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 KLHL14Q9P2G3 628 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 FTCDO95954 541 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 KRT3P12035 628 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 NR2F2P24468 414 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 SIK1P57059 783 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 DNAAF3Q8N9W5 541 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 GRK7Q8WTQ7 553 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 THOC1Q96FV9 657 aaKnown RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 ZNF277Q9NRM2 450 aaPredicted RBP16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 INTUQ9ULD6 942 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
NOTCH4-201ENST00000375023 USP17L3A6NCW0 530 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 USP17L4A6NCW7 530 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 MOCS3O95396 460 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 RBL2Q08999 1139 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 TMED2Q15363 201 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 USP17L1Q7RTZ2 530 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 AOX1Q06278 1338 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 PRPSAP1Q14558 356 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 BANK1Q8NDB2 785 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 CCNA1P78396 465 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 ZBTB41Q5SVQ8 909 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 FASTKD5Q7L8L6 764 aaKnown RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 CERS3Q8IU89 383 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 CEP170P1Q96L14 293 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 IREB2P48200 963 aaKnown RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 CCDC93Q567U6 631 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 YAF2Q8IY57 180 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 HSPH1Q92598 858 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 CALN1Q9BXU9 219 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 CPSF2Q9P2I0 782 aaKnown RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 PIK3C2GO75747 1445 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 ERBB3P21860 1342 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 S100BP04271 92 aaPredicted RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 RPSAP08865 295 aaKnown RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 POTEDQ86YR6 584 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 ZNF274Q96GC6 653 aaPredicted RBP16■□□□□ 0.15
NOTCH4-201ENST00000375023 NLRP4Q96MN2 994 aa16■□□□□ 0.15
NOTCH4-201ENST00000375023 TYW5A2RUC4 315 aaKnown RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 MAPK4P31152 587 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 NR5A1Q13285 461 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 TBCKQ8TEA7 893 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 RAB3IPQ96QF0 476 aaPredicted RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 UBE2TQ9NPD8 197 aaPredicted RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 LRRC8AQ8IWT6 810 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 COG7P83436 770 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
NOTCH4-201ENST00000375023 MTMR6Q9Y217 621 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms