RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NEK9Q8TD19 979 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 CRYGNQ8WXF5 182 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 RAD54LQ92698 747 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 P2RX5Q93086 422 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 CSRNP1Q96S65 589 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 MXD3Q9BW11 206 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 UBA5Q9GZZ9 404 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 TMEM60Q9H2L4 133 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 L2HGDHQ9H9P8 463 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KCNMB3Q9NPA1 279 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 PIM2Q9P1W9 311 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 A0A0U1RQG5 324 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 DDTLA6NHG4 134 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 LGALS16A8MUM7 142 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 POLD1P28340 1107 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 TXKP42681 527 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 PRCPP42785 496 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 COPB1P53618 953 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 KRT83P78385 493 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 PDE4DQ08499 809 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 NFIAQ12857 509 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 CDC37Q16543 378 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 AOC3Q16853 763 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 QRICH1Q2TAL8 776 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 JAKMIP3Q5VZ66 844 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 ISM2Q6H9L7 571 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 RASGRP2Q7LDG7 609 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 NIPA1Q7RTP0 329 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 LRRC47Q8N1G4 583 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 TC2NQ8N9U0 490 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 OR8K1Q8NGG5 319 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 JDP2Q8WYK2 163 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 DPF2Q92785 391 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 CEP63Q96MT8 703 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 MTRQ99707 1265 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 CGNQ9P2M7 1197 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 FAM184BQ9ULE4 1060 aa9.73□□□□□ -0.85
SNRNP40-202ENST00000373720 SOCS7O14512 581 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 MFAP3LO75121 409 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 IPO7O95373 1038 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SLU7O95391 586 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 VEGFAP15692 232 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SCP2P22307 547 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 RPA1P27694 616 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 MARSP56192 900 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 ASIC1P78348 528 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 KRT31Q15323 416 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 TTI2Q6NXR4 508 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 XRRA1Q6P2D8 792 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 STXBP4Q6ZWJ1 553 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 CSGALNACT2Q8N6G5 542 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 PPP1R13BQ96KQ4 1090 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 ERGIC2Q96RQ1 377 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 FEZ1Q99689 392 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 ANO3Q9BYT9 981 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 WDR11Q9BZH6 1224 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 DNAJC18Q9H819 358 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 LUC7LQ9NQ29 371 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 ZNF70Q9UC06 446 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 KCNG1Q9UIX4 513 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 CAPN11Q9UMQ6 739 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 LUC7L2Q9Y383 392 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 FRMPD2Q68DX3 1309 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
SNRNP40-202ENST00000373720 SLX4Q8IY92 1834 aa9.71□□□□□ -0.85
SNRNP40-202ENST00000373720 USP17L10C9JJH3 530 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 WNT7AO00755 349 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 NDUFB10O96000 172 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 BCRP11274 1271 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 GAP43P17677 238 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ABCD1P33897 745 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 CYLC1P35663 651 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 USP14P54578 494 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ZNF280AP59817 542 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ARHGAP4P98171 946 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 FKBP3Q00688 224 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ATP2B2Q01814 1243 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 EHHADHQ08426 723 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 GRB10Q13322 594 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 EDRF1Q3B7T1 1238 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 GLIPR1L2Q4G1C9 344 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms