RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 KCNA5P22460 613 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
SSR4-204ENST00000370087 LEXMQ3ZCV2 418 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 CHST3Q7LGC8 479 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 ALYREFQ86V81 257 aaKnown RBP18.11■□□□□ 0.49
SSR4-204ENST00000370087 FAM178BQ8IXR5 827 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 CCDC155Q8N6L0 562 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
SSR4-204ENST00000370087 C17orf80Q9BSJ5 609 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 WDR19Q8NEZ3 1342 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
SSR4-204ENST00000370087 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 SALL3Q9BXA9 1300 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 SNHG28P0DPA3 235 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 HIC1Q14526 733 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
SSR4-204ENST00000370087 SEPT14Q6ZU15 432 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 RAD9AQ99638 391 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 HDAC6Q9UBN7 1215 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 GTF2IRD1Q9UHL9 959 aa18.1■□□□□ 0.49
SSR4-204ENST00000370087 GH1P01241 217 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 ZNF286BP0CG31 522 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 GOLGA8HP0CJ92 632 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 ZNF200P98182 395 aaPredicted RBP18.09■□□□□ 0.49
SSR4-204ENST00000370087 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
SSR4-204ENST00000370087 GJD3Q8N144 294 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 TAAR1Q96RJ0 339 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
SSR4-204ENST00000370087 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
SSR4-204ENST00000370087 ABHD14A-ACY1A0A1B0GW23 586 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 MX1P20591 662 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 PSEN2P49810 448 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 HAND2P61296 217 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 ALX1Q15699 326 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 ZNF618Q5T7W0 954 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
SSR4-204ENST00000370087 ALG1Q9BT22 464 aa18.08■□□□□ 0.48
SSR4-204ENST00000370087 A0A0D9SFI3 127 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 PRR33A8MZF0 331 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 FGAP02671 866 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 PTCRAQ6ISU1 281 aaPredicted RBP18.07■□□□□ 0.48
SSR4-204ENST00000370087 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 FAM227BQ96M60 508 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
SSR4-204ENST00000370087 RALGAPA2Q2PPJ7 1873 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 GRXCR2A6NFK2 248 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 HAS3O00219 553 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 F2P00734 622 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 MFSD10Q14728 455 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 RGS22Q8NE09 1264 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
SSR4-204ENST00000370087 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 PIEZO1Q92508 2521 aa18.06■□□□□ 0.48
SSR4-204ENST00000370087 NEDD4P46934 1319 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 H3BQ06 376 aaPredicted RBP18.05■□□□□ 0.48
SSR4-204ENST00000370087 CASTP20810 708 aaKnown RBP18.05■□□□□ 0.48
SSR4-204ENST00000370087 SSTR3P32745 418 aaPredicted RBP18.05■□□□□ 0.48
SSR4-204ENST00000370087 PTK7Q13308 1070 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 IKBKEQ14164 716 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 CDC37Q16543 378 aaPredicted RBP18.05■□□□□ 0.48
SSR4-204ENST00000370087 DGKDQ16760 1214 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 KIAA0753Q2KHM9 967 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 ZNF589Q86UQ0 364 aaPredicted RBP18.05■□□□□ 0.48
SSR4-204ENST00000370087 NEK9Q8TD19 979 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 ZKSCAN3Q9BRR0 538 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 PNMA2Q9UL42 364 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 TRIOO75962 3097 aa18.05■□□□□ 0.48
SSR4-204ENST00000370087 DOCK5Q9H7D0 1870 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 COL4A6Q14031 1691 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 SORBS3O60504 671 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 LGR5O75473 907 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 PARNO95453 639 aaKnown RBP18.04■□□□□ 0.48
SSR4-204ENST00000370087 EIF2AK2P19525 551 aaKnown RBP18.04■□□□□ 0.48
SSR4-204ENST00000370087 HTRA4P83105 476 aaPredicted RBP18.04■□□□□ 0.48
SSR4-204ENST00000370087 SP7Q8TDD2 431 aaPredicted RBP18.04■□□□□ 0.48
SSR4-204ENST00000370087 ANKS1AQ92625 1134 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
SSR4-204ENST00000370087 ABCB11O95342 1321 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 B4DLN1 442 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
SSR4-204ENST00000370087 MRPL12P52815 198 aaKnown RBP18.03■□□□□ 0.48
SSR4-204ENST00000370087 MYOCDQ8IZQ8 938 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 DBF4BQ8NFT6 615 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
SSR4-204ENST00000370087 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
SSR4-204ENST00000370087 MRPL38Q96DV4 380 aaKnown RBP18.03■□□□□ 0.48
SSR4-204ENST00000370087 RMDN3Q96TC7 470 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
SSR4-204ENST00000370087 ZMYM6O95789 1325 aa18.02■□□□□ 0.48
SSR4-204ENST00000370087 EFCAB14O75071 495 aa18.02■□□□□ 0.48
SSR4-204ENST00000370087 HOXD8P13378 290 aaPredicted RBP18.02■□□□□ 0.48
SSR4-204ENST00000370087 STXBP2Q15833 593 aa18.02■□□□□ 0.48
SSR4-204ENST00000370087 EPC2Q52LR7 807 aa18.02■□□□□ 0.48
SSR4-204ENST00000370087 PPTC7Q8NI37 304 aa18.02■□□□□ 0.48
SSR4-204ENST00000370087 TTC14Q96N46 770 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms