RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TKFCQ3LXA3 575 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CCDC178Q5BJE1 867 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZC3H12BQ5HYM0 836 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF697Q5TEC3 545 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TBC1D9Q6ZT07 1266 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 NECAB2Q7Z6G3 386 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ANKRD49Q8WVL7 239 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 DDX12PQ92771 950 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CRACR2AQ9BSW2 395 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 DNAI2Q9GZS0 605 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 UNC45AQ9H3U1 944 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZIM2Q9NZV7 527 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CEP131Q9UPN4 1083 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TRPC6Q9Y210 931 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 LRRFIP2Q9Y608 721 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 SYNDIG1LA6NDD5 238 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 BHMG1C9JSJ3 638 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 H3BRB1 525 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TCEA3O75764 348 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 H2AFXP16104 143 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 POLR2FP61218 127 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ARID5AQ03989 594 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MTMR3Q13615 1198 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF483Q8TF39 744 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 C1orf74Q96LT6 269 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZIC5Q96T25 663 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MFRPQ9BY79 579 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TUT1Q9H6E5 874 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZSWIM6Q9HCJ5 1215 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CLIP2Q9UDT6 1046 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 INPP5FQ9Y2H2 1132 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF236Q9UL36 1845 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 OTOFQ9HC10 1997 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 PRAMEF22A3QJZ6 481 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TMEM127O75204 238 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 KIAA0754O94854 1291 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 CYP1A2P05177 515 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 PECAM1P16284 738 aaPredicted RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 GNAT2P19087 354 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 SARSP49591 514 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TBC1D8BQ0IIM8 1120 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 SART3Q15020 963 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TBC1D25Q3MII6 688 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 MTHFD1LQ6UB35 978 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 GTF3C2Q8WUA4 911 aaPredicted RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 SRPK1Q96SB4 655 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TYW1Q9NV66 732 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 ATXN2Q99700 1313 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 hCG_1642624A0A1W2PR95 340 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 ESYT3A0FGR9 886 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TRIM64A6NGJ6 449 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TRIM64BA6NI03 449 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TOR1BO14657 336 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 PPP1R12BO60237 982 aaPredicted RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 EVI5O60447 810 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TLR2O60603 784 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 RTN2O75298 545 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 TBC1D8O95759 1140 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 P4HBP07237 508 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 CETPP11597 493 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 BTF3P20290 206 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 ATP2B4P23634 1241 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 FOXK1P85037 733 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 EXOSC10Q01780 885 aaKnown RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 HYIQ5T013 277 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 PACS1Q6VY07 963 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 BTN2A1Q7KYR7 527 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 DAAM2Q86T65 1068 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 KIAA1328Q86T90 577 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 MYOCDQ8IZQ8 938 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 JAKMIP2Q96AA8 810 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 BAG1Q99933 345 aaPredicted RBP5.67□□□□□ -1.5
UBE3D-202ENST00000369746 FAM167BQ9BTA0 163 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 CNPY2Q9Y2B0 182 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 C2CD2Q9Y426 696 aa5.67□□□□□ -1.5
UBE3D-202ENST00000369746 ABCC4O15439 1325 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 FAM25EA8MYX2 175 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 EIF3CLB5ME19 914 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 F8VZ95 297 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CDC45O75419 566 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF24P17028 368 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 PLA2G4AP47712 749 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 SLC8A3P57103 927 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 MAP3K12Q12852 859 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 TNFAIP1Q13829 316 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 WTAPQ15007 396 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 KMT5BQ4FZB7 885 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 STRIP1Q5VSL9 837 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CCDC129Q6ZRS4 1044 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 TADA2BQ86TJ2 420 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CCDC112Q8NEF3 446 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 MIPOL1Q8TD10 442 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 GUCD1Q96NT3 240 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 PLEKHG4BQ96PX9 1271 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 EIF3CQ99613 913 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms