RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ALS2Q96Q42 1657 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 UIMC1Q96RL1 719 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CPVLQ9H3G5 476 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PUF60Q9UHX1 559 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 IVNS1ABPQ9Y6Y0 642 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 STXBP3O00186 592 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ARHGAP4P98171 946 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PTPAQ15257 358 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PROM2Q8N271 834 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 TRIM58Q8NG06 486 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CTNNBL1Q8WYA6 563 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 NAP1L3Q99457 506 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CARD6Q9BX69 1037 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CENPHQ9H3R5 247 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 RASAL2Q9UJF2 1139 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 BZW2Q9Y6E2 419 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PALM3A6NDB9 673 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 MMP14P50281 582 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ALCAMQ13740 583 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 WHAMMP3Q1A5X7 153 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 MIGA2Q7L4E1 593 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 MSANTD4Q8NCY6 345 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PPP1R13BQ96KQ4 1090 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ZDHHC15Q96MV8 337 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 LSM14BQ9BX40 385 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF341Q9BYN7 854 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 EHD4Q9H223 541 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF277Q9NRM2 450 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ATF5Q9Y2D1 282 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CEP83Q9Y592 693 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 RGPD2P0DJD1 1756 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PHLPP1O60346 1717 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 TRPM3Q9HCF6 1732 aaPredicted RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 STAT1P42224 750 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 VAV2P52735 878 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ZBED6P86452 979 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 RBL2Q08999 1139 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 KRT31Q15323 416 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 CLUL1Q15846 466 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 XKR9Q5GH70 373 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 TYW1BQ6NUM6 668 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 RSBN1LQ6PCB5 846 aaPredicted RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 SYCE1Q8N0S2 351 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ANKRD35Q8N283 1001 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 NEK9Q8TD19 979 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM151AQ8WW52 585 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ANKS1AQ92625 1134 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 RAD54LQ92698 747 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 DDX12PQ92771 950 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 EMILIN3Q9NT22 766 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PHLPP2Q6ZVD8 1323 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 K7ENM7 598 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 NR2F2P24468 414 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 BIRC3Q13489 604 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PRKG1Q13976 671 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM83BQ5T0W9 1011 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 MAEAQ7L5Y9 396 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 APOBEC3FQ8IUX4 373 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 CCDC170Q8IYT3 715 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ZBTB9Q96C00 473 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 CAPZA3Q96KX2 299 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 MAD2L2Q9UI95 211 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L15C9J2P7 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L13C9JLJ4 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L11C9JVI0 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L18D6R9N7 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L22D6RA61 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L17D6RBQ6 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L19D6RCP7 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L20D6RJB6 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 TBX3O15119 743 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 HSF2BPO75031 334 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PRR29P0C7W0 189 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 IFFO1Q0D2I5 559 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L24Q0WX57 530 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L6PQ6QN14 398 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 POTEDQ86YR6 584 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 TEX2Q8IWB9 1127 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 C10orf67Q8IYJ2 551 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PRPF38AQ8NAV1 312 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 DESI2Q9BSY9 194 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 TMEM206Q9H813 350 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PARVGQ9HBI0 331 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 SPTLC3Q9NUV7 552 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ADD3Q9UEY8 706 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 LGALS16A8MUM7 142 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 EFCAB8A8MWE9 144 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 CCND2P30279 289 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 PSMC2P35998 433 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 FKBP1AP62942 108 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 DMP1Q13316 513 aaPredicted RBP5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 EXOC3L4Q17RC7 722 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 ERCC6LQ2NKX8 1250 aa5.85□□□□□ -1.47
SMNDC1-202ENST00000369603 BRDTQ58F21 947 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms