RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 PPARGC1AQ9UBK2 798 aaKnown RBP7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 TRAV20A0A0B4J274 112 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 IRS4O14654 1257 aaPredicted RBP7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 SGSM2O43147 1006 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 ADCY3O60266 1144 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 ASGR2P07307 311 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 FAM153BP0C7A2 387 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 ZSCAN22P10073 491 aaPredicted RBP7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 FGFR1P11362 822 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 FBLN1P23142 703 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 PMLP29590 882 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 RASA3Q14644 834 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 FAM209AQ5JX71 171 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 LRRC47Q8N1G4 583 aaKnown RBP7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 NETO2Q8NC67 525 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 PEX11GQ96HA9 241 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 DEPDC7Q96QD5 511 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 PHF20Q9BVI0 1012 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 RAPGEFL1Q9UHV5 662 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 NPFFR2Q9Y5X5 522 aa7.04□□□□□ -1.28
RNU4-28P-201ENST00000364739 KDM2BQ8NHM5 1336 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 MYO1BO43795 1136 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 LSAMPQ13449 338 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 SF3A1Q15459 793 aaKnown RBP7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 TESK1Q15569 626 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 FAM129CQ86XR2 697 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 ARMC5Q96C12 935 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 SRPK1Q96SB4 655 aaKnown RBP7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 DNAJC7Q99615 494 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 JAM3Q9BX67 310 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 NUDT5Q9UKK9 219 aa7.03□□□□□ -1.28
RNU4-28P-201ENST00000364739 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 ZNF385BQ569K4 471 aa7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 PWWP2AQ96N64 755 aa7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 TRAF6Q9Y4K3 522 aa7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 X6R8D5 127 aa7.02□□□□□ -1.29
RNU4-28P-201ENST00000364739 NCANO14594 1321 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 ASXL2Q76L83 1435 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 PFKLP17858 780 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 FOXO4P98177 505 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 IFRD2Q12894 506 aaPredicted RBP7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 MILR1Q7Z6M3 343 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 FAM26EQ8N5C1 309 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 ZBTB38Q8NAP3 1195 aaPredicted RBP7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 DACT3Q96B18 629 aaPredicted RBP7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 TSPAN17Q96FV3 270 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 CDC6Q99741 560 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 GPR27Q9NS67 375 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 PALD1Q9ULE6 856 aa7.01□□□□□ -1.29
RNU4-28P-201ENST00000364739 PRRG2O14669 202 aa7□□□□□ -1.29
RNU4-28P-201ENST00000364739 NCAM1P13591 858 aa7□□□□□ -1.29
RNU4-28P-201ENST00000364739 GTF2A2P52657 109 aa7□□□□□ -1.29
RNU4-28P-201ENST00000364739 TARBP2Q15633 366 aaKnown RBP7□□□□□ -1.29
RNU4-28P-201ENST00000364739 DCP2Q8IU60 420 aaKnown RBP7□□□□□ -1.29
RNU4-28P-201ENST00000364739 ZNF669Q96BR6 464 aaPredicted RBP7□□□□□ -1.29
RNU4-28P-201ENST00000364739 COA3Q9Y2R0 106 aaPredicted RBP7□□□□□ -1.29
RNU4-28P-201ENST00000364739 TRBV23-1A0A0A0MS06 115 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 ZBTB7AO95365 584 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 PLA2G1BP04054 148 aaKnown RBP6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 AFF3P51826 1226 aaKnown RBP6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 SLC9A5Q14940 896 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 MROH9Q5TGP6 573 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 TTLL10Q6ZVT0 673 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 SCUBE1Q8IWY4 988 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 RBM12BQ8IXT5 1001 aaKnown RBP6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 ADGRG2Q8IZP9 1017 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 Q8N1Y9 231 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 DCAF4Q8WV16 495 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 DDX11Q96FC9 970 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 EXOC2Q96KP1 924 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 NOX5Q96PH1 765 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 KCNJ15Q99712 375 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 AP5M1Q9H0R1 490 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 FAN1Q9Y2M0 1017 aa6.99□□□□□ -1.29
RNU4-28P-201ENST00000364739 H7BY64 318 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 RFXAPO00287 272 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 COL6A2P12110 1019 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 BMS1Q14692 1282 aaKnown RBP6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 AMIGO3Q86WK7 504 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 SMARCC2Q8TAQ2 1214 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 SEC14L1Q92503 715 aa6.98□□□□□ -1.29
RNU4-28P-201ENST00000364739 B8ZZF3 427 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 BMP7P18075 431 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 STAT5AP42229 794 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 TCERG1LQ5VWI1 586 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 STEAP3Q658P3 488 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 CD300LDQ6UXZ3 194 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms