RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PPP2R5CQ13362 524 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 HERC4Q5GLZ8 1057 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-202ENST00000357162 DAB2IPQ5VWQ8 1189 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 SETD3Q86TU7 594 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-202ENST00000357162 PHKBQ93100 1093 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 POLKQ9UBT6 870 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-202ENST00000357162 COPG1Q9Y678 874 aaKnown RBP7.12□□□□□ -1.27
VPS13B-202ENST00000357162 ARHGEF37A1IGU5 675 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 NDUFA10O95299 355 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 MDM2Q00987 491 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-202ENST00000357162 NEK8Q86SG6 692 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 TTC13Q8NBP0 860 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 SGSM3Q96HU1 749 aa7.12□□□□□ -1.27
VPS13B-202ENST00000357162 IQCA1LA6NCM1 817 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 FAM107AO95990 144 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 DDX5P17844 614 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 DHX38Q92620 1227 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PPP1R2P1Q96PQ5 205 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PTPRKQ15262 1439 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ABCB11O95342 1321 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MEFVO15553 781 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 CCDC22O60826 627 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TBC1D8O95759 1140 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ZC3H6P61129 1189 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 EPN3Q9H201 632 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 RPL26L1Q9UNX3 145 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 A0A1W2PQC6 194 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 HAND2P61296 217 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 SURF1Q15526 300 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 XAGE3Q8WTP9 111 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 SIKE1Q9BRV8 207 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 EPS8L2Q9H6S3 715 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ARHGEF35A5YM69 484 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 STRNO43815 780 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 OCA2Q04671 838 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PARD6BQ9BYG5 372 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 EXOC5O00471 708 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ATF7P17544 494 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 RBM5P52756 815 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 KAZNQ674X7 775 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ZSCAN29Q8IWY8 852 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 HACE1Q8IYU2 909 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PPANQ9NQ55 473 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 AATFQ9NY61 560 aaKnown RBP eCLIP7.11□□□□□ -1.275e-6■■■■□ 19.3
VPS13B-202ENST00000357162 PA2G4Q9UQ80 394 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MRFAP1Q9Y605 127 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ENO4A6NNW6 628 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MAP3K7CLP57077 242 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PARP9Q8IXQ6 854 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ITIH6Q6UXX5 1313 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 COPB1P53618 953 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MRPS9P82933 396 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TUBA8Q9NY65 449 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TPX2Q9ULW0 747 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ADCY10Q96PN6 1610 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 NEK2P51955 445 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 CORO7P57737 925 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 DCAF17Q5H9S7 520 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 VPS37BQ9H9H4 285 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 DNAJC17Q9NVM6 304 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 C4BPBP20851 252 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 DHX34Q14147 1143 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 ME3Q16798 604 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 GPATCH4Q5T3I0 446 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TRIM68Q6AZZ1 485 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 CACTINQ8WUQ7 758 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 IQGAP3Q86VI3 1631 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 TMCC1O94876 653 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 SERPINB6P35237 376 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 GUCY2DQ02846 1103 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 L2HGDHQ9H9P8 463 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 KLC4Q9NSK0 619 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 PLA2R1Q13018 1463 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 AP3B1O00203 1094 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 EXOC3L4Q17RC7 722 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 CHMP6Q96FZ7 201 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 EYA3Q99504 573 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MRPL44Q9H9J2 332 aaKnown RBP7.11□□□□□ -1.27
VPS13B-202ENST00000357162 SPC25Q9HBM1 224 aa7.11□□□□□ -1.27
VPS13B-202ENST00000357162 MYO1FO00160 1098 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MFAP3LO75121 409 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 ARID5AQ03989 594 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 HEXIM1O94992 359 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 DMP1Q13316 513 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 GRAMD4Q6IC98 578 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 VPS39Q96JC1 886 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 LRWD1Q9UFC0 647 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TNKSO95271 1327 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 CDC42BPBQ9Y5S2 1711 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 DEAF1O75398 565 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 KLC1Q07866 573 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MAPRE2Q15555 327 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 PALM2Q8IXS6 379 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 GIPC2Q8TF65 315 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 FANCLQ9NW38 375 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TAB2Q9NYJ8 693 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms