RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KIAA1841Q6NSI8 718 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 HDAC11Q96DB2 347 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 RIPOR2Q9Y4F9 1068 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 KDM5AP29375 1690 aaKnown RBP19.63■□□□□ 0.73
COL18A1-202ENST00000355480 MEIS1O00470 390 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 TFAMQ00059 246 aaKnown RBP19.63■□□□□ 0.73
COL18A1-202ENST00000355480 CACTINQ8WUQ7 758 aaKnown RBP19.63■□□□□ 0.73
COL18A1-202ENST00000355480 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 PPP6R2O75170 966 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 AFPP02771 609 aaKnown RBP19.62■□□□□ 0.73
COL18A1-202ENST00000355480 KIF9Q9HAQ2 790 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 PI4KBQ9UBF8 816 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-202ENST00000355480 PTPN22Q9Y2R2 807 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 PCDHA5Q9Y5H7 936 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 SGK1O00141 431 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 ZNF589Q86UQ0 364 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-202ENST00000355480 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 ARPP19P56211 112 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 NLRP10Q86W26 655 aa19.62■□□□□ 0.73
COL18A1-202ENST00000355480 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-202ENST00000355480 RNF10Q8N5U6 811 aaKnown RBP19.62■□□□□ 0.73
COL18A1-202ENST00000355480 A0A1W2PQ27 194 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 A0A1W2PQ64 194 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 A0A1W2PQD8 194 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 hCG_1984214I3L0E3 225 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 ZNF713Q8N859 430 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 CLIC2O15247 247 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 S100BP04271 92 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 MTERF2Q49AM1 385 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 USP17L8P0C7I0 530 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 KRT3P12035 628 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 CASP14P31944 242 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 DALRD3Q5D0E6 543 aaKnown RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 JADE1Q6IE81 842 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 PI16Q6UXB8 463 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 ZNF653Q96CK0 615 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 TRIM11Q96F44 468 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 SMYD2Q9NRG4 433 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 ABCC12Q96J65 1359 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 RASEFQ8IZ41 740 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 DCLK2Q8N568 766 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 DHTKD1Q96HY7 919 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 SLC38A10Q9HBR0 1119 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 GOLGA8SH3BPF8 625 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 IREB2P48200 963 aaKnown RBP19.61■□□□□ 0.73
COL18A1-202ENST00000355480 GNGT1P63211 74 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 USP17L2Q6R6M4 530 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 ZBTB33Q86T24 672 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 P2RX5Q93086 422 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 DYNLL2Q96FJ2 89 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 IFT122Q9HBG6 1241 aa19.61■□□□□ 0.73
COL18A1-202ENST00000355480 SRGAP2BP0DMP2 458 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 MAPK4P31152 587 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 MAP3K21Q5TCX8 1036 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 ZNF215Q9UL58 517 aaPredicted RBP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 NEO1Q92859 1461 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 GOLGA8KD6RF30 607 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 PKP1Q13835 747 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 C7orf31Q8N865 590 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 MRFAP1L1Q96HT8 127 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 PDE1BQ01064 536 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 CCDC38Q502W7 563 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 LRRC8AQ8IWT6 810 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 PPP1R16BQ96T49 567 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 LRRN2O75325 713 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 LMNB2Q03252 620 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 NOP9Q86U38 636 aaKnown RBP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 UNC5CLQ8IV45 518 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 CCNYQ8ND76 341 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 NXF1Q9UBU9 619 aaKnown RBP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 STK17AQ9UEE5 414 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 METP08581 1390 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 KIF3CO14782 793 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 SRP68Q9UHB9 627 aaKnown RBP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 ABT1Q9ULW3 272 aaKnown RBP19.6■□□□□ 0.73
COL18A1-202ENST00000355480 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 IGSF1Q8N6C5 1336 aa19.6■□□□□ 0.73
COL18A1-202ENST00000355480 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-202ENST00000355480 USP17L3A6NCW0 530 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 USP17L4A6NCW7 530 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 ATP1A2P50993 1020 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 USP17L1Q7RTZ2 530 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 SMYD4Q8IYR2 804 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-202ENST00000355480 MCUQ8NE86 351 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 BAIAP2L1Q9UHR4 511 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 DISP1Q96F81 1524 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 MYCP01106 439 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-202ENST00000355480 RAPH1Q70E73 1250 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 SLC12A6Q9UHW9 1150 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 AATKQ6ZMQ8 1374 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 ERVV-1B6SEH8 477 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 PUS7LQ9H0K6 701 aaKnown RBP19.59■□□□□ 0.73
COL18A1-202ENST00000355480 OSTNP61366 133 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 RUNDC3BQ96NL0 473 aa19.59■□□□□ 0.73
COL18A1-202ENST00000355480 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms