RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
APP-203ENST00000354192 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
APP-203ENST00000354192 PI4KBQ9UBF8 816 aa20.22■□□□□ 0.83
APP-203ENST00000354192 BICDL2A1A5D9 508 aa20.22■□□□□ 0.83
APP-203ENST00000354192 SPDYE3A6NKU9 549 aa20.22■□□□□ 0.83
APP-203ENST00000354192 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
APP-203ENST00000354192 PARD6BQ9BYG5 372 aa20.22■□□□□ 0.83
APP-203ENST00000354192 FAM198AQ9UFP1 575 aa20.22■□□□□ 0.83
APP-203ENST00000354192 EPS15P42566 896 aa20.21■□□□□ 0.83
APP-203ENST00000354192 PLS1Q14651 629 aa20.21■□□□□ 0.83
APP-203ENST00000354192 TCERG1LQ5VWI1 586 aa20.21■□□□□ 0.83
APP-203ENST00000354192 CDAN1Q8IWY9 1227 aa20.21■□□□□ 0.83
APP-203ENST00000354192 BCAS3Q9H6U6 928 aa20.21■□□□□ 0.83
APP-203ENST00000354192 MRFAP1Q9Y605 127 aa20.21■□□□□ 0.83
APP-203ENST00000354192 DDX39AO00148 427 aaKnown RBP20.21■□□□□ 0.83
APP-203ENST00000354192 AKR1B10O60218 316 aa20.21■□□□□ 0.83
APP-203ENST00000354192 PRPHP41219 470 aa20.21■□□□□ 0.83
APP-203ENST00000354192 SH3BP5LQ7L8J4 393 aa20.21■□□□□ 0.83
APP-203ENST00000354192 TBC1D5Q92609 795 aa20.21■□□□□ 0.83
APP-203ENST00000354192 CCDC42Q96M95 316 aa20.21■□□□□ 0.83
APP-203ENST00000354192 SUGCTQ9HAC7 445 aa20.21■□□□□ 0.83
APP-203ENST00000354192 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
APP-203ENST00000354192 MYH8P13535 1937 aa20.21■□□□□ 0.83
APP-203ENST00000354192 EPHB6O15197 1021 aa20.2■□□□□ 0.82
APP-203ENST00000354192 DNM2P50570 870 aa20.2■□□□□ 0.82
APP-203ENST00000354192 JAG1P78504 1218 aa20.2■□□□□ 0.82
APP-203ENST00000354192 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
APP-203ENST00000354192 GPATCH4Q5T3I0 446 aaKnown RBP20.2■□□□□ 0.82
APP-203ENST00000354192 ANO3Q9BYT9 981 aa20.2■□□□□ 0.82
APP-203ENST00000354192 GYS2P54840 703 aa20.2■□□□□ 0.82
APP-203ENST00000354192 MAP3K9P80192 1104 aa20.2■□□□□ 0.82
APP-203ENST00000354192 KCTD19Q17RG1 926 aaPredicted RBP20.2■□□□□ 0.82
APP-203ENST00000354192 GOLGA1Q92805 767 aa20.2■□□□□ 0.82
APP-203ENST00000354192 HAS1Q92839 578 aa20.2■□□□□ 0.82
APP-203ENST00000354192 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
APP-203ENST00000354192 SWAP70Q9UH65 585 aa20.2■□□□□ 0.82
APP-203ENST00000354192 PODNQ7Z5L7 613 aa20.2■□□□□ 0.82
APP-203ENST00000354192 DHTKD1Q96HY7 919 aaPredicted RBP20.2■□□□□ 0.82
APP-203ENST00000354192 FEZ1Q99689 392 aa20.2■□□□□ 0.82
APP-203ENST00000354192 NAPGQ99747 312 aaPredicted RBP20.2■□□□□ 0.82
APP-203ENST00000354192 NAA15Q9BXJ9 866 aaKnown RBP20.2■□□□□ 0.82
APP-203ENST00000354192 RIC8AQ9NPQ8 531 aa20.2■□□□□ 0.82
APP-203ENST00000354192 EFCAB8A8MWE9 144 aa20.19■□□□□ 0.82
APP-203ENST00000354192 NDUFB10O96000 172 aa20.19■□□□□ 0.82
APP-203ENST00000354192 EEF1GP26641 437 aaKnown RBP20.19■□□□□ 0.82
APP-203ENST00000354192 KCNB1Q14721 858 aa20.19■□□□□ 0.82
APP-203ENST00000354192 RAD54LQ92698 747 aa20.19■□□□□ 0.82
APP-203ENST00000354192 ONECUT3O60422 494 aaPredicted RBP20.19■□□□□ 0.82
APP-203ENST00000354192 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
APP-203ENST00000354192 PIGOQ8TEQ8 1089 aa20.19■□□□□ 0.82
APP-203ENST00000354192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.19■□□□□ 0.82
APP-203ENST00000354192 LACRTQ9GZZ8 138 aa20.19■□□□□ 0.82
APP-203ENST00000354192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.19■□□□□ 0.82
APP-203ENST00000354192 EDIL3O43854 480 aa20.18■□□□□ 0.82
APP-203ENST00000354192 PHACTR2O75167 634 aa20.18■□□□□ 0.82
APP-203ENST00000354192 CXCR5P32302 372 aa20.18■□□□□ 0.82
APP-203ENST00000354192 PSMC6P62333 389 aa20.18■□□□□ 0.82
APP-203ENST00000354192 MTMR9Q96QG7 549 aa20.18■□□□□ 0.82
APP-203ENST00000354192 THAP9Q9H5L6 903 aa20.18■□□□□ 0.82
APP-203ENST00000354192 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
APP-203ENST00000354192 KCND1Q9NSA2 647 aa20.18■□□□□ 0.82
APP-203ENST00000354192 HOMER2Q9NSB8 354 aa20.18■□□□□ 0.82
APP-203ENST00000354192 RNASE9P60153 205 aaKnown RBP20.18■□□□□ 0.82
APP-203ENST00000354192 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
APP-203ENST00000354192 DNAAF5Q86Y56 855 aa20.18■□□□□ 0.82
APP-203ENST00000354192 JAKMIP2Q96AA8 810 aa20.18■□□□□ 0.82
APP-203ENST00000354192 SH2D3AQ9BRG2 576 aa20.18■□□□□ 0.82
APP-203ENST00000354192 RGL1Q9NZL6 768 aa20.18■□□□□ 0.82
APP-203ENST00000354192 SPA17Q15506 151 aa20.18■□□□□ 0.82
APP-203ENST00000354192 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
APP-203ENST00000354192 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
APP-203ENST00000354192 TSG101Q99816 390 aa20.18■□□□□ 0.82
APP-203ENST00000354192 C7orf25Q9BPX7 421 aa20.18■□□□□ 0.82
APP-203ENST00000354192 NDST4Q9H3R1 872 aa20.18■□□□□ 0.82
APP-203ENST00000354192 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.18■□□□□ 0.82
APP-203ENST00000354192 TMOD2Q9NZR1 351 aa20.18■□□□□ 0.82
APP-203ENST00000354192 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
APP-203ENST00000354192 PCNTO95613 3336 aa20.17■□□□□ 0.82
APP-203ENST00000354192 LRRC10BA6NIK2 292 aa20.17■□□□□ 0.82
APP-203ENST00000354192 BMS1Q14692 1282 aaKnown RBP20.17■□□□□ 0.82
APP-203ENST00000354192 TMC4Q7Z404 712 aa20.17■□□□□ 0.82
APP-203ENST00000354192 FAM114A1Q8IWE2 563 aa20.17■□□□□ 0.82
APP-203ENST00000354192 ZNF185O15231 689 aa20.17■□□□□ 0.82
APP-203ENST00000354192 PLA2G4BP0C869 781 aa20.17■□□□□ 0.82
APP-203ENST00000354192 COASYQ13057 564 aa20.17■□□□□ 0.82
APP-203ENST00000354192 HHIPL2Q6UWX4 724 aa20.17■□□□□ 0.82
APP-203ENST00000354192 MYOCDQ8IZQ8 938 aa20.17■□□□□ 0.82
APP-203ENST00000354192 CPXCR1Q8N123 301 aa20.17■□□□□ 0.82
APP-203ENST00000354192 PNMA6AP0CW24 399 aaPredicted RBP20.16■□□□□ 0.82
APP-203ENST00000354192 ZSCAN20P17040 1043 aaPredicted RBP20.16■□□□□ 0.82
APP-203ENST00000354192 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
APP-203ENST00000354192 SKIDA1Q1XH10 827 aa20.16■□□□□ 0.82
APP-203ENST00000354192 DCAF17Q5H9S7 520 aaPredicted RBP20.16■□□□□ 0.82
APP-203ENST00000354192 CT47A1Q5JQC4 288 aaPredicted RBP20.16■□□□□ 0.82
APP-203ENST00000354192 WDR59Q6PJI9 974 aa20.16■□□□□ 0.82
APP-203ENST00000354192 IKZF4Q9H2S9 585 aa20.16■□□□□ 0.82
APP-203ENST00000354192 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
APP-203ENST00000354192 REXO2Q9Y3B8 237 aaKnown RBP20.16■□□□□ 0.82
APP-203ENST00000354192 RREB1Q92766 1687 aa20.16■□□□□ 0.82
APP-203ENST00000354192 RCCD1A6NED2 376 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms