RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 P2RX7Q99572 595 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 NT5C3AQ9H0P0 336 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 GOPCQ9HD26 462 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 MAGEC2Q9UBF1 373 aaPredicted RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 PRR12Q9ULL5 1215 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 UTRNP46939 3433 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 KDM3AQ9Y4C1 1321 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 SHTN1A0MZ66 631 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 GOLGA6L9A6NEM1 432 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 WNT10BO00744 389 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 CASP14P31944 242 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 STAT2P52630 851 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 SYT10Q6XYQ8 523 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 SLFN12Q8IYM2 578 aa22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.76■■□□□ 1.23
CHRNA3-202ENST00000348639 ECM1Q16610 540 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 ANKRD40Q6AI12 368 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 SPDYE3A6NKU9 549 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 LGALS16A8MUM7 142 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 RRP9O43818 475 aaKnown RBP22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 FECHP22830 423 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 SREBF1P36956 1147 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 FXR1P51114 621 aaKnown RBP eCLIP22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 UBXN1Q04323 297 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 TRAF1Q13077 416 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 SYCP1Q15431 976 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 TRIM65Q6PJ69 517 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 TOGARAM2Q6ZUX3 1019 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 ZBED3Q96IU2 234 aaPredicted RBP22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 MYOZ2Q9NPC6 264 aa22.75■■□□□ 1.23
CHRNA3-202ENST00000348639 OPLAHO14841 1288 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 TBX3O15119 743 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 TAL1P17542 331 aaPredicted RBP22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 Q4G0T1 1027 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 KIAA1755Q5JYT7 1200 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 DYMQ7RTS9 669 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 TEX2Q8IWB9 1127 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 DDX12PQ92771 950 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 UIMC1Q96RL1 719 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 SLC39A2Q9NP94 309 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 A0A1W2PQC6 194 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 ZYXQ15942 572 aaKnown RBP22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 CENPPQ6IPU0 288 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 MTERF4Q7Z6M4 381 aaKnown RBP22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 FAM114A1Q8IWE2 563 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 MB21D1Q8N884 522 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 ZNF507Q8TCN5 953 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 MAP7D2Q96T17 732 aa22.74■■□□□ 1.23
CHRNA3-202ENST00000348639 PHLPP2Q6ZVD8 1323 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 PIK3CDO00329 1044 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 EHHADHQ08426 723 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 PSMD2Q13200 908 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 ZNF710Q8N1W2 664 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 ETNPPLQ8TBG4 499 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 HPS3Q969F9 1004 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 BCS1LQ9Y276 419 aa22.73■■□□□ 1.23
CHRNA3-202ENST00000348639 SOWAHDA6NJG2 315 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 NFKBIEO00221 500 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 FAM83BQ5T0W9 1011 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 GUF1Q8N442 669 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 CIITAP33076 1130 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 CAP2P40123 477 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 TNIP1Q15025 636 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 PRR16Q569H4 304 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 TUBGCP2Q9BSJ2 902 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 SEMA6BQ9H3T3 888 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 L2HGDHQ9H9P8 463 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 PGAP2Q9UHJ9 254 aa22.72■■□□□ 1.23
CHRNA3-202ENST00000348639 DNM2P50570 870 aa22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 MAP3K10Q02779 954 aa22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 HSP90AA2PQ14568 343 aaPredicted RBP22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 CHURC1Q8WUH1 139 aa22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 LENG9Q96B70 501 aa22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
CHRNA3-202ENST00000348639 PLA2G6O60733 806 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 IDEP14735 1019 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 MTF1Q14872 753 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 SAMD1Q6SPF0 538 aaPredicted RBP22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 RAD9BQ6WBX8 426 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 DNAJC19Q96DA6 116 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 CNOT6LQ96LI5 555 aaKnown RBP22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 FAM20AQ96MK3 541 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 SH2D4AQ9H788 454 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 ABHD10Q9NUJ1 306 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 DNAI1Q9UI46 699 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 KIAA1024Q9UPX6 916 aa22.7■■□□□ 1.23
CHRNA3-202ENST00000348639 CYP3A4P08684 503 aa22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 CCDC175P0C221 793 aa22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 SPIRE1Q08AE8 756 aa22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 R3HDM1Q15032 1099 aaKnown RBP22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 BMP2KQ9NSY1 1161 aaPredicted RBP22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 FER1L6Q2WGJ9 1857 aa22.7■■□□□ 1.22
CHRNA3-202ENST00000348639 FAM86B1E9PN63 330 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 EGFRP00533 1210 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 FAM86B2P0C5J1 330 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 PRKCSHP14314 528 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 HOXA13P31271 388 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 HAUS3Q68CZ6 603 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms