RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SPAG5Q96R06 1193 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 CCNE1P24864 410 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 FLT3P36888 993 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 ASIC1P78348 528 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 C11orf91Q3C1V1 193 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
LMNA-201ENST00000347559 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 AP1M1Q9BXS5 423 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 GGT7Q9UJ14 662 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 PRPF3O43395 683 aaKnown RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 DNAJC8O75937 253 aaPredicted RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 NPY5RQ15761 445 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 CAPRIN2Q6IMN6 1127 aaKnown RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.88■□□□□ 0.29
LMNA-201ENST00000347559 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 A0A1W2PQJ5 194 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 KCNK3O14649 394 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 DIAPH2O60879 1101 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 INHBEP58166 350 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 TTLL11Q8NHH1 800 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 TAF4BQ92750 862 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 LRRC45Q96CN5 670 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 NEUROG2Q9H2A3 272 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 GOLPH3Q9H4A6 298 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 LRRC4CQ9HCJ2 640 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
LMNA-201ENST00000347559 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 ARFGEF2Q9Y6D5 1785 aa16.88■□□□□ 0.29
LMNA-201ENST00000347559 BICDL2A1A5D9 508 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 DRD4P21917 467 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 MAB21L3Q8N8X9 362 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
LMNA-201ENST00000347559 SELENOSQ9BQE4 189 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 NDST4Q9H3R1 872 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 F8W031 263 aaPredicted RBP16.87■□□□□ 0.29
LMNA-201ENST00000347559 H0YGN5 161 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 PPIP5K2O43314 1243 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 RHOBTB3O94955 611 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 UPP2O95045 317 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 ITGA6P23229 1130 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 BIRC3Q13489 604 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 LRIG3Q6UXM1 1119 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 C3orf20Q8ND61 904 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 AGAP11Q8TF27 550 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 CHMP6Q96FZ7 201 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.292e-6■■□□□ 12.2
LMNA-201ENST00000347559 RNF14Q9UBS8 474 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 NFS1Q9Y697 457 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 AP1G2O75843 785 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 KLRC1P26715 233 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
LMNA-201ENST00000347559 DTHD1Q6ZMT9 781 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 ENAHQ8N8S7 591 aaPredicted RBP16.87■□□□□ 0.29
LMNA-201ENST00000347559 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
LMNA-201ENST00000347559 GREM2Q9H772 168 aa16.87■□□□□ 0.29
LMNA-201ENST00000347559 CEP104O60308 925 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
LMNA-201ENST00000347559 FAM167BQ9BTA0 163 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 TRIM31Q9BZY9 425 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 ISCUQ9H1K1 167 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
LMNA-201ENST00000347559 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 C5orf60A6NFR6 353 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 ORC4O43929 436 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 FUT2Q10981 343 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 FIGNQ5HY92 759 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 ESR2Q92731 530 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 DDX47Q9H0S4 455 aaKnown RBP16.86■□□□□ 0.29
LMNA-201ENST00000347559 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
LMNA-201ENST00000347559 RTL9Q8NET4 1388 aa16.86■□□□□ 0.29
LMNA-201ENST00000347559 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 CYP27B1O15528 508 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 SPDYE1Q8NFV5 336 aaPredicted RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 ELAC2Q9BQ52 826 aaKnown RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 DAPK3O43293 454 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 PRCCQ92733 491 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms