RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 MBTPS1Q14703 1052 aa17.1■□□□□ 0.33
CSHL1-203ENST00000346606 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
CSHL1-203ENST00000346606 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
CSHL1-203ENST00000346606 TCP11L1Q9NUJ3 509 aa17.1■□□□□ 0.33
CSHL1-203ENST00000346606 COL20A1Q9P218 1284 aa17.1■□□□□ 0.33
CSHL1-203ENST00000346606 WDR19Q8NEZ3 1342 aa17.1■□□□□ 0.33
CSHL1-203ENST00000346606 ABHD14A-ACY1A0A1B0GW23 586 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 PRR33A8MZF0 331 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 TRIM71Q2Q1W2 868 aaKnown RBP17.09■□□□□ 0.33
CSHL1-203ENST00000346606 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
CSHL1-203ENST00000346606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
CSHL1-203ENST00000346606 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 CCDC155Q8N6L0 562 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 COL4A4P53420 1690 aaPredicted RBP17.09■□□□□ 0.33
CSHL1-203ENST00000346606 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
CSHL1-203ENST00000346606 PTPRSQ13332 1948 aa17.08■□□□□ 0.33
CSHL1-203ENST00000346606 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
CSHL1-203ENST00000346606 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
CSHL1-203ENST00000346606 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
CSHL1-203ENST00000346606 HIC1Q14526 733 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 ALX1Q15699 326 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 ZNF618Q5T7W0 954 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 MPHOSPH6Q99547 160 aaKnown RBP17.08■□□□□ 0.32
CSHL1-203ENST00000346606 TOMM22Q9NS69 142 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
CSHL1-203ENST00000346606 GRXCR2A6NFK2 248 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 PARNO95453 639 aaKnown RBP17.07■□□□□ 0.32
CSHL1-203ENST00000346606 GH1P01241 217 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 FGAP02671 866 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 MX1P20591 662 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 USH1GQ495M9 461 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
CSHL1-203ENST00000346606 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
CSHL1-203ENST00000346606 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
CSHL1-203ENST00000346606 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
CSHL1-203ENST00000346606 HAS3O00219 553 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 GOLGA8HP0CJ92 632 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
CSHL1-203ENST00000346606 PSEN2P49810 448 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 IKBKEQ14164 716 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 NEK9Q8TD19 979 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
CSHL1-203ENST00000346606 SALL3Q9BXA9 1300 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 B4DLN1 442 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 F2P00734 622 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 IGHDP01880 384 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 SSTR3P32745 418 aaPredicted RBP17.05■□□□□ 0.32
CSHL1-203ENST00000346606 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
CSHL1-203ENST00000346606 PTK7Q13308 1070 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 DGKDQ16760 1214 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 C7orf31Q8N865 590 aa17.05■□□□□ 0.32
CSHL1-203ENST00000346606 H3BQ06 376 aaPredicted RBP17.04■□□□□ 0.32
CSHL1-203ENST00000346606 EFCAB14O75071 495 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 LGR5O75473 907 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 ZNF286BP0CG31 522 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 HAND2P61296 217 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 HTRA4P83105 476 aaPredicted RBP17.04■□□□□ 0.32
CSHL1-203ENST00000346606 MFSD10Q14728 455 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 KIAA0753Q2KHM9 967 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 DBF4BQ8NFT6 615 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
CSHL1-203ENST00000346606 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
CSHL1-203ENST00000346606 EMID1Q96A84 441 aaPredicted RBP17.04■□□□□ 0.32
CSHL1-203ENST00000346606 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 TTC14Q96N46 770 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 INSL6Q9Y581 213 aa17.04■□□□□ 0.32
CSHL1-203ENST00000346606 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 ALADP13716 330 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 STXBP2Q15833 593 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 SMC5Q8IY18 1101 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
CSHL1-203ENST00000346606 UIMC1Q96RL1 719 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
CSHL1-203ENST00000346606 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 HOXD8P13378 290 aaPredicted RBP17.02■□□□□ 0.32
CSHL1-203ENST00000346606 MRE11P49959 708 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
CSHL1-203ENST00000346606 EPC2Q52LR7 807 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
CSHL1-203ENST00000346606 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 PPTC7Q8NI37 304 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 ANKS1AQ92625 1134 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 IWS1Q96ST2 819 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.32
CSHL1-203ENST00000346606 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms