RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 BMP8BP34820 402 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
RAB5C-201ENST00000346213 KRT32Q14532 448 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 PPP2R5BQ15173 497 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 FAM126BQ8IXS8 530 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 SCFD2Q8WU76 684 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 LRCH3Q96II8 777 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 Q9Y3F1 56 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 ELP1O95163 1332 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 GOLGA8AA7E2F4 631 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 GOLGA8BA8MQT2 603 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 GCOM1H8Y6P7 765 aaPredicted RBP18.54■□□□□ 0.56
RAB5C-201ENST00000346213 ZBTB43O43298 467 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 POLR2MP0CAP2 368 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 RTN1Q16799 776 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 VSIG10LQ86VR7 867 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 PCSK9Q8NBP7 692 aaKnown RBP18.54■□□□□ 0.56
RAB5C-201ENST00000346213 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
RAB5C-201ENST00000346213 MAF1Q9H063 256 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 NID2Q14112 1375 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 ARVCFO00192 962 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 CLTBP09497 229 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 CALM1P0DP23 149 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 CALM2P0DP24 149 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 CALM3P0DP25 149 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 MYCLP12524 364 aaPredicted RBP18.54■□□□□ 0.56
RAB5C-201ENST00000346213 C9orf50Q5SZB4 431 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 GLT1D1Q96MS3 346 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 IWS1Q96ST2 819 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
RAB5C-201ENST00000346213 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
RAB5C-201ENST00000346213 KIAA1217Q5T5P2 1943 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 A0A0U1RQG5 324 aaPredicted RBP18.53■□□□□ 0.56
RAB5C-201ENST00000346213 A6NJR5 290 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 CD4P01730 458 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 STXBP2Q15833 593 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 AFG1LQ8WV93 481 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 VWCEQ96DN2 955 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 LZTS2Q9BRK4 669 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 TRPV6Q9H1D0 765 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 NCOA5Q9HCD5 579 aaKnown RBP18.53■□□□□ 0.56
RAB5C-201ENST00000346213 ZSWIM6Q9HCJ5 1215 aa18.53■□□□□ 0.56
RAB5C-201ENST00000346213 KIAA0355O15063 1070 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 GNAQP50148 359 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 NTRK3Q16288 839 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 FBXL16Q8N461 479 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 KAT2BQ92831 832 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 IL17RAQ96F46 866 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 PGBD1Q96JS3 809 aa18.52■□□□□ 0.56
RAB5C-201ENST00000346213 STXBP3O00186 592 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 B4GALT4O60513 344 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 EIF3JO75822 258 aaKnown RBP18.51■□□□□ 0.55
RAB5C-201ENST00000346213 MMP3P08254 477 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 MYL3P08590 195 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 UBA1P22314 1058 aaKnown RBP18.51■□□□□ 0.55
RAB5C-201ENST00000346213 ANAPC15P60006 121 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 ITGA7Q13683 1181 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 PKN1Q16512 942 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 TOX2Q96NM4 488 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 UBE2OQ9C0C9 1292 aaKnown RBP18.51■□□□□ 0.55
RAB5C-201ENST00000346213 V9GY48 417 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-201ENST00000346213 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
RAB5C-201ENST00000346213 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 TTLL4Q14679 1199 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 MAP3K20Q9NYL2 800 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 RTEL1Q9NZ71 1219 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 CDH23Q9H251 3354 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 HMGB1P09429 215 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 EVCP57679 992 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 HIC1Q14526 733 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 PHKBQ93100 1093 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 TRMT13Q9NUP7 481 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 TMEM260Q9NX78 707 aa18.5■□□□□ 0.55
RAB5C-201ENST00000346213 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-201ENST00000346213 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.55
RAB5C-201ENST00000346213 SHHQ15465 462 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 C16orf59Q7L2K0 433 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 TMEM39AQ9NV64 488 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 MRVI1Q9Y6F6 885 aa18.49■□□□□ 0.55
RAB5C-201ENST00000346213 NKRFO15226 690 aaKnown RBP eCLIP18.48■□□□□ 0.55
RAB5C-201ENST00000346213 GH1P01241 217 aa18.48■□□□□ 0.55
RAB5C-201ENST00000346213 NBPF20Q3BBV1 942 aa18.48■□□□□ 0.55
RAB5C-201ENST00000346213 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
RAB5C-201ENST00000346213 PPP1R12CQ9BZL4 782 aa18.48■□□□□ 0.55
RAB5C-201ENST00000346213 ALDH8A1Q9H2A2 487 aaPredicted RBP18.48■□□□□ 0.55
RAB5C-201ENST00000346213 PSTPIP2Q9H939 334 aa18.48■□□□□ 0.55
RAB5C-201ENST00000346213 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms