RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ITIH3Q06033 890 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 TROAPQ12815 778 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 BYSLQ13895 437 aaKnown RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 ZNF572Q7Z3I7 529 aaPredicted RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 VGLL2Q8N8G2 317 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 DDX47Q9H0S4 455 aaKnown RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 DPH5Q9H2P9 285 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 ACTR5Q9H9F9 607 aaPredicted RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 CTSWP56202 376 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 KRT71Q3SY84 523 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 GLE1Q53GS7 698 aaKnown RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 PPP4R3AQ6IN85 833 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 ARFGAP2Q8N6H7 521 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 NOD2Q9HC29 1040 aa16.38■□□□□ 0.21
CLCN1-201ENST00000343257 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
CLCN1-201ENST00000343257 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 GCKP35557 465 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 DHTKD1Q96HY7 919 aaPredicted RBP16.37■□□□□ 0.21
CLCN1-201ENST00000343257 TACO1Q9BSH4 297 aaKnown RBP16.37■□□□□ 0.21
CLCN1-201ENST00000343257 SPEF2Q9C093 1822 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 DDX60Q8IY21 1712 aaKnown RBP16.37■□□□□ 0.21
CLCN1-201ENST00000343257 UPP2O95045 317 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 C4orf32Q8N8J7 132 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 UHMK1Q8TAS1 419 aaKnown RBP16.37■□□□□ 0.21
CLCN1-201ENST00000343257 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
CLCN1-201ENST00000343257 BIRC2Q13490 618 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 GKAP1Q5VSY0 366 aaPredicted RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 WHAMMQ8TF30 809 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 NSMCE1Q8WV22 266 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 SELENOSQ9BQE4 189 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 PYM1Q9BRP8 204 aaKnown RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 PPP2R2AP63151 447 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 TAF4BQ92750 862 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 ADAMTS1Q9UHI8 967 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 TMCO5BA8MYB1 307 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 ELF3P78545 371 aaPredicted RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 IFFO1Q0D2I5 559 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 ADAT2Q7Z6V5 191 aaKnown RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 CABP7Q86V35 215 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 NLRP3Q96P20 1036 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
CLCN1-201ENST00000343257 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
CLCN1-201ENST00000343257 DAPK3O43293 454 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 ATP6V1G2O95670 118 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 SLC5A1P13866 664 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 KCNB1Q14721 858 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 TXNRD1Q16881 649 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 SLC12A6Q9UHW9 1150 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 ATRNO75882 1429 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 TECP42680 631 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 CRYMQ14894 314 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 CD302Q8IX05 232 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 SPDL1Q96EA4 605 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 CELF4Q9BZC1 486 aaKnown RBP16.35■□□□□ 0.21
CLCN1-201ENST00000343257 TRIM9Q9C026 710 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
CLCN1-201ENST00000343257 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 ENO4A6NNW6 628 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 PPP1R12AO14974 1030 aaPredicted RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 CTNND1O60716 968 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 HSPA9P38646 679 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 TNNC1P63316 161 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 RUBCNQ92622 972 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 KIF9Q9HAQ2 790 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 GOPCQ9HD26 462 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 MRPL12P52815 198 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 RSRC1Q96IZ7 334 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 AMACRQ9UHK6 382 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 AKAP11Q9UKA4 1901 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms