RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 USP11P51784 963 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 JAG1P78504 1218 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
CFAP54-201ENST00000342887 BMS1Q14692 1282 aaKnown RBP9.08□□□□□ -0.96
CFAP54-201ENST00000342887 MREGQ8N565 214 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 SLC30A5Q8TAD4 765 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 LACRTQ9GZZ8 138 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 BLZF1Q9H2G9 400 aa9.08□□□□□ -0.96
CFAP54-201ENST00000342887 GCFC2P16383 781 aaKnown RBP9.07□□□□□ -0.96
CFAP54-201ENST00000342887 EYA3Q99504 573 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 KAT14Q9H8E8 782 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 AGPAT5Q9NUQ2 364 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 MCM9Q9NXL9 1143 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 TUBBP07437 444 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 RRP1BQ14684 758 aaKnown RBP9.07□□□□□ -0.96
CFAP54-201ENST00000342887 INF2Q27J81 1249 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 EDRF1Q3B7T1 1238 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 ARHGAP29Q52LW3 1261 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 DACT2Q5SW24 774 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 RASGRP4Q8TDF6 673 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 DESI2Q9BSY9 194 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 PLCB1Q9NQ66 1216 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 FCER1AP12319 257 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 ANXA13P27216 316 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 KCNQ4P56696 695 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 POU5F1Q01860 360 aaKnown RBP9.07□□□□□ -0.96
CFAP54-201ENST00000342887 NONOQ15233 471 aaKnown RBP eCLIP9.07□□□□□ -0.96
CFAP54-201ENST00000342887 DTHD1Q6ZMT9 781 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 LRRC57Q8N9N7 239 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 DCAF4Q8WV16 495 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 TXLNGYQ9BZA5 131 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 DMAC2Q9NW81 257 aa9.07□□□□□ -0.96
CFAP54-201ENST00000342887 EPN1Q9Y6I3 576 aaPredicted RBP9.07□□□□□ -0.96
CFAP54-201ENST00000342887 ATXN2Q99700 1313 aaKnown RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 LDHCP07864 332 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 AKR1B1P15121 316 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 MCM7P33993 719 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 SREBF1P36956 1147 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 KLK7P49862 253 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 HADHBP55084 474 aaKnown RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 OR8K1Q8NGG5 319 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 CAVIN3Q969G5 261 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 EXOC1Q9NV70 894 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 BAG3O95817 575 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 ENPEPQ07075 957 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 TRAPPC3LQ5T215 181 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 FAM196AQ6ZSG2 479 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 CABP7Q86V35 215 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 ADGRF4Q8IZF3 695 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 NUP133Q8WUM0 1156 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 RPGRIP1Q96KN7 1286 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 ABCF2Q9UG63 623 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 DAAM1Q9Y4D1 1078 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 SERPINB2P05120 415 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 VAV2P52735 878 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 NOA1Q8NC60 698 aaKnown RBP9.06□□□□□ -0.96
CFAP54-201ENST00000342887 TBCKQ8TEA7 893 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 GOLGA1Q92805 767 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 PIGSQ96S52 555 aa9.06□□□□□ -0.96
CFAP54-201ENST00000342887 TFRCP02786 760 aaKnown RBP9.05□□□□□ -0.96
CFAP54-201ENST00000342887 CASQ1P31415 396 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 NLRP5P59047 1200 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 PDXDC1Q6P996 788 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 IRF2BP2Q7Z5L9 587 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 TUBGCP2Q9BSJ2 902 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 GDF3Q9NR23 364 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 TTC7AQ9ULT0 858 aaPredicted RBP9.05□□□□□ -0.96
CFAP54-201ENST00000342887 ERICH4A6NGS2 130 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 TSPY2A6NKD2 308 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 ZBTB5O15062 677 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 AFMP43652 599 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 STYK1Q6J9G0 422 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 CD302Q8IX05 232 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 RASGEF1CQ8N431 466 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 LMO3Q8TAP4 145 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 TMEM260Q9NX78 707 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 TRIM10Q9UDY6 481 aa9.05□□□□□ -0.96
CFAP54-201ENST00000342887 BICDL2A1A5D9 508 aa9.04□□□□□ -0.96
CFAP54-201ENST00000342887 LRRIQ3A6PVS8 624 aaPredicted RBP9.04□□□□□ -0.96
CFAP54-201ENST00000342887 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
CFAP54-201ENST00000342887 TBC1D12O60347 775 aa9.04□□□□□ -0.96
CFAP54-201ENST00000342887 TOM1O60784 492 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms