RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 TFAP4Q01664 338 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 UNC13DQ70J99 1090 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 SYN2Q92777 582 aaPredicted RBP22.89■■□□□ 1.26
CLPB-202ENST00000340729 KAT2BQ92831 832 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 DRC1Q96MC2 740 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 NUCKS1Q9H1E3 243 aaKnown RBP22.89■■□□□ 1.26
CLPB-202ENST00000340729 FAM207AQ9NSI2 230 aaPredicted RBP22.89■■□□□ 1.26
CLPB-202ENST00000340729 RBM12Q9NTZ6 932 aaKnown RBP22.89■■□□□ 1.26
CLPB-202ENST00000340729 STK17AQ9UEE5 414 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 MINPP1Q9UNW1 487 aa22.89■■□□□ 1.26
CLPB-202ENST00000340729 THSD7AQ9UPZ6 1657 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 CCDC88AQ3V6T2 1871 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 USP8P40818 1118 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 LIG3P49916 1009 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 IRX3P78415 501 aaPredicted RBP22.89■■□□□ 1.25
CLPB-202ENST00000340729 PAK2Q13177 524 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 NONOQ15233 471 aaKnown RBP eCLIP22.89■■□□□ 1.25
CLPB-202ENST00000340729 PTF1AQ7RTS3 328 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 HEATR3Q7Z4Q2 680 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 MMTAG2Q9BU76 263 aaKnown RBP22.89■■□□□ 1.25
CLPB-202ENST00000340729 GEMIN8Q9NWZ8 242 aaKnown RBP22.89■■□□□ 1.25
CLPB-202ENST00000340729 SALL4Q9UJQ4 1053 aa22.89■■□□□ 1.25
CLPB-202ENST00000340729 PALM3A6NDB9 673 aaPredicted RBP22.88■■□□□ 1.25
CLPB-202ENST00000340729 KCNQ4P56696 695 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 RRAGAQ7L523 313 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 CALML4Q96GE6 196 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 MATR3P43243 847 aaKnown RBP eCLIP22.88■■□□□ 1.25
CLPB-202ENST00000340729 C12orf60Q5U649 245 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 YTHDF3Q7Z739 585 aaKnown RBP22.88■■□□□ 1.25
CLPB-202ENST00000340729 CNPY4Q8N129 248 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 LINC00116Q8NCU8 138 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.88■■□□□ 1.25
CLPB-202ENST00000340729 MTMR8Q96EF0 704 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 MMRN2Q9H8L6 949 aa22.88■■□□□ 1.25
CLPB-202ENST00000340729 CXCR5P32302 372 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 HGSNATQ68CP4 663 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 SV2BQ7L1I2 683 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 NEK8Q86SG6 692 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 EIF1ADQ8N9N8 165 aaKnown RBP22.87■■□□□ 1.25
CLPB-202ENST00000340729 SPZ1Q9BXG8 430 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 TAF1P21675 1872 aa22.87■■□□□ 1.25
CLPB-202ENST00000340729 NDUFAB1O14561 156 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 SKIDA1Q1XH10 827 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 CFAP58Q5T655 872 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 WHAMMQ8TF30 809 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 LUC7LQ9NQ29 371 aaKnown RBP22.86■■□□□ 1.25
CLPB-202ENST00000340729 NHSQ6T4R5 1651 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 WTIPA6NIX2 430 aaPredicted RBP22.86■■□□□ 1.25
CLPB-202ENST00000340729 CCNT1O60563 726 aaKnown RBP22.86■■□□□ 1.25
CLPB-202ENST00000340729 LRRC55Q6ZSA7 311 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 PROM2Q8N271 834 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 HINFPQ9BQA5 517 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 SLC39A2Q9NP94 309 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 RIC8AQ9NPQ8 531 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 MCM9Q9NXL9 1143 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 SMARCAL1Q9NZC9 954 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 GGA2Q9UJY4 613 aa22.86■■□□□ 1.25
CLPB-202ENST00000340729 NCK2O43639 380 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 FSBPO95073 299 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 GNA11P29992 359 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 PDCLQ13371 301 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 PRPF38AQ8NAV1 312 aaKnown RBP22.85■■□□□ 1.25
CLPB-202ENST00000340729 EHD2Q9NZN4 543 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 ZNF652Q9Y2D9 606 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 ZNF233A6NK53 670 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 GLI1P08151 1106 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 PSMD2Q13200 908 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 LETM2Q2VYF4 491 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 MICALCLQ6ZW33 695 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 EPN3Q9H201 632 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 C6orf50Q9HD87 102 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 BLOC1S4Q9NUP1 217 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 CEP72Q9P209 647 aa22.85■■□□□ 1.25
CLPB-202ENST00000340729 HNRNPH1P31943 449 aaKnown RBP22.84■■□□□ 1.25
CLPB-202ENST00000340729 SLC1A4P43007 532 aa22.84■■□□□ 1.25
CLPB-202ENST00000340729 RASSF7Q02833 373 aa22.84■■□□□ 1.25
CLPB-202ENST00000340729 GFPT1Q06210 699 aaPredicted RBP22.84■■□□□ 1.25
CLPB-202ENST00000340729 EHHADHQ08426 723 aa22.84■■□□□ 1.25
CLPB-202ENST00000340729 GRB10Q13322 594 aa22.84■■□□□ 1.25
CLPB-202ENST00000340729 CCDC43Q96MW1 224 aaKnown RBP22.84■■□□□ 1.25
CLPB-202ENST00000340729 PSMB7Q99436 277 aa22.84■■□□□ 1.25
CLPB-202ENST00000340729 MYMKA6NI61 221 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 CES2O00748 559 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 MEFVO15553 781 aaPredicted RBP22.83■■□□□ 1.25
CLPB-202ENST00000340729 HEXIM1O94992 359 aaKnown RBP22.83■■□□□ 1.25
CLPB-202ENST00000340729 SERPING1P05155 500 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 SMARCA1P28370 1054 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 LSP1P33241 339 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 TECP42680 631 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 CARSP49589 748 aaKnown RBP22.83■■□□□ 1.25
CLPB-202ENST00000340729 NAB2Q15742 525 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 SLC9C1Q4G0N8 1177 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 CACNA2D4Q7Z3S7 1137 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 PIK3R5Q8WYR1 880 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 NCAPGQ9BPX3 1015 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 LRRC27Q9C0I9 530 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 PCDHGC5Q9Y5F6 944 aa22.83■■□□□ 1.25
CLPB-202ENST00000340729 USP17L8P0C7I0 530 aa22.83■■□□□ 1.24
CLPB-202ENST00000340729 FXR2P51116 673 aaKnown RBP eCLIP22.83■■□□□ 1.24
CLPB-202ENST00000340729 MRPS25P82663 173 aaKnown RBP22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms