RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CALML4Q96GE6 196 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 FGFBP2Q9BYJ0 223 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 ZNF536O15090 1300 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEFA5A3E0 1075 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 EML1O00423 815 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 MSH4O15457 936 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 PEX10O60683 326 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 DDNO94850 711 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 RHOBTB3O94955 611 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 TPM3P06753 285 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 IDEP14735 1019 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 CYP4A11Q02928 519 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 KRT31Q15323 416 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 TPD52L1Q16890 204 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 TMEM266Q2M3C6 531 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 KRT79Q5XKE5 535 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 E4F1Q66K89 784 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 SV2BQ7L1I2 683 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 GIMAP8Q8ND71 665 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 DDX12PQ92771 950 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 C7orf25Q9BPX7 421 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 WDR18Q9BV38 432 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 TBC1D7Q9P0N9 293 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 COL20A1Q9P218 1284 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 ADD3Q9UEY8 706 aaKnown RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 CYP3A7-CYP3A51PA0A087WV96 503 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 A0A1B0GTH6 734 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 CYP3A7P24462 503 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 RPS12P25398 132 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 SREBF1P36956 1147 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 MMP14P50281 582 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 VASPP50552 380 aaPredicted RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 ANKRD40Q6AI12 368 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 CATSPER3Q86XQ3 398 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 RAD54LQ92698 747 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 CDK5RAP3Q96JB5 506 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 PYM1Q9BRP8 204 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 RAVER2Q9HCJ3 691 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 TAB2Q9NYJ8 693 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 RGL1Q9NZL6 768 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 RWDD2AQ9UIY3 292 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 ARFGEF1Q9Y6D6 1849 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 MUM1L1Q5H9M0 696 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 CHURC1Q8WUH1 139 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 WRNIP1Q96S55 665 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 DUSP9Q99956 384 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 GGA3Q9NZ52 723 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 IMPACTQ9P2X3 320 aa8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 POLR2AP24928 1970 aaKnown RBP8.29□□□□□ -1.08
SRFBP1-201ENST00000339397 IGLV3-22A0A075B6J6 115 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ZNF76P36508 570 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TBX2Q13207 712 aaPredicted RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TNFAIP1Q13829 316 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 KCNB1Q14721 858 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TMEM119Q4V9L6 283 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 NCAPH2Q6IBW4 605 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TMEM139Q8IV31 216 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 IL31RAQ8NI17 732 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 MBOAT7Q96N66 472 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 EXOC1Q9NV70 894 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 GPRC5DQ9NZD1 345 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 RIPK3Q9Y572 518 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 H7C1D1 291 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 CHMP2AO43633 222 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 CTNND1O60716 968 aaKnown RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 FLOT1O75955 427 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ARP10275 920 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 GCFC2P16383 781 aaKnown RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 VCAM1P19320 739 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 AP3B2Q13367 1082 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ARSHQ5FYA8 562 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TCP11X2Q5H9J9 407 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 TTI2Q6NXR4 508 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 DNAJC19Q96DA6 116 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 RMND1Q9NWS8 449 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 CCPG1Q9ULG6 757 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ZHX2Q9Y6X8 837 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 LTBP3Q9NS15 1303 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 BRCA2P51587 3418 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 KCNJ18B7U540 433 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 PIK3CDO00329 1044 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 N4BP3O15049 544 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 CBFA2T2O43439 604 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ALAS1P13196 640 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms