RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ACTR5Q9H9F9 607 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 NOP53Q9NZM5 478 aaKnown RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 KRT86O43790 486 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 CHRNDQ07001 517 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 TUBB2AQ13885 445 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 SPA17Q15506 151 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 UHMK1Q8TAS1 419 aaKnown RBP13.04□□□□□ -0.32
LIMK2-202ENST00000333611 TUBB2BQ9BVA1 445 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
LIMK2-202ENST00000333611 PSMA7O14818 248 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
LIMK2-202ENST00000333611 WLSQ5T9L3 541 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 SEPT14Q6ZU15 432 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
LIMK2-202ENST00000333611 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 MTRQ99707 1265 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 MROH5Q6ZUA9 1318 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 NCK2O43639 380 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 SETSIPP0DME0 302 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 ALX1Q15699 326 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 PHF20Q9BVI0 1012 aa13.04□□□□□ -0.32
LIMK2-202ENST00000333611 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
LIMK2-202ENST00000333611 AKR1B10O60218 316 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 MDH1P40925 334 aaKnown RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 HSPA2P54652 639 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 ARID5AQ03989 594 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 QPCTQ16769 361 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 DTHD1Q6ZMT9 781 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 TEKT4Q8WW24 435 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 LRWD1Q9UFC0 647 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 MYH8P13535 1937 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 PLEKP08567 350 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 CYLC1P35663 651 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 FNBP4Q8N3X1 1017 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 SEC16BQ96JE7 1060 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 OSBPL7Q9BZF2 842 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 STIM2Q9P246 746 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 GMNCA6NCL1 334 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 SCG2P13521 617 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 PDE4DQ08499 809 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 TUBGCP2Q9BSJ2 902 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
LIMK2-202ENST00000333611 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
LIMK2-202ENST00000333611 PBX1P40424 430 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 KCNQ4P56696 695 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 LETM2Q2VYF4 491 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 NFRKBQ6P4R8 1299 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 MGARPQ8TDB4 240 aa13.02□□□□□ -0.32
LIMK2-202ENST00000333611 NOVA2Q9UNW9 492 aaKnown RBP13.02□□□□□ -0.32
LIMK2-202ENST00000333611 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 GCOM1H8Y6P7 765 aaPredicted RBP13.02□□□□□ -0.33
LIMK2-202ENST00000333611 BUB1O43683 1085 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 BMP15O95972 392 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.33
LIMK2-202ENST00000333611 HERVK_113P62684 666 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 IL17AQ16552 155 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 MDM1Q8TC05 714 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 PLA2G12BQ9BX93 195 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 MCM9Q9NXL9 1143 aa13.02□□□□□ -0.33
LIMK2-202ENST00000333611 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 MOCS3O95396 460 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FAM107AO95990 144 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 EPHB4P54760 987 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SLC8A3P57103 927 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 KRT83P78385 493 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms