RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FAM153CQ494X1 144 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 YY1AP1Q9H869 796 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 EPB41L5Q9HCM4 733 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 FAM153AQ9UHL3 310 aa26.13■■□□□ 1.77
TSKU-201ENST00000333090 GUCY2DQ02846 1103 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 DYMQ7RTS9 669 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 CCDC155Q8N6L0 562 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 BAP1Q92560 729 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 CALML4Q96GE6 196 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 MMTAG2Q9BU76 263 aaKnown RBP26.12■■□□□ 1.77
TSKU-201ENST00000333090 TANGO6Q9C0B7 1094 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 BSDC1Q9NW68 430 aaPredicted RBP26.12■■□□□ 1.77
TSKU-201ENST00000333090 STX8Q9UNK0 236 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 PJA2O43164 708 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 HEXIM1O94992 359 aaKnown RBP26.12■■□□□ 1.77
TSKU-201ENST00000333090 NAPAP54920 295 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 MCTP2Q6DN12 878 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 TFCP2L1Q9NZI6 479 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 TAF1P21675 1872 aa26.12■■□□□ 1.77
TSKU-201ENST00000333090 NONOQ15233 471 aaKnown RBP eCLIP26.11■■□□□ 1.775e-10■■■■■ 34.1
TSKU-201ENST00000333090 GLE1Q53GS7 698 aaKnown RBP26.11■■□□□ 1.77
TSKU-201ENST00000333090 MKNK2Q9HBH9 465 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 SPATA31A1Q5TZJ5 1347 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 A6NNZ2 444 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 GUCY2FP51841 1108 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 TUBB8Q3ZCM7 444 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 SV2BQ7L1I2 683 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 NLRC4Q9NPP4 1024 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 MYH14Q7Z406 1995 aaKnown RBP26.11■■□□□ 1.77
TSKU-201ENST00000333090 RREB1Q92766 1687 aa26.11■■□□□ 1.77
TSKU-201ENST00000333090 ZNF233A6NK53 670 aa26.1■■□□□ 1.77
TSKU-201ENST00000333090 HNRNPH1P31943 449 aaKnown RBP26.1■■□□□ 1.77
TSKU-201ENST00000333090 MYH1P12882 1939 aa26.1■■□□□ 1.77
TSKU-201ENST00000333090 PDXDC1Q6P996 788 aa26.1■■□□□ 1.77
TSKU-201ENST00000333090 TMED8Q6PL24 325 aaPredicted RBP26.1■■□□□ 1.77
TSKU-201ENST00000333090 B4GALNT4Q76KP1 1039 aa26.1■■□□□ 1.77
TSKU-201ENST00000333090 RNPC3Q96LT9 517 aaKnown RBP26.1■■□□□ 1.77
TSKU-201ENST00000333090 MYMKA6NI61 221 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 KIAA0754O94854 1291 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 TSPY3P0CV98 308 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 TSPY8P0CW00 308 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 TXKP42681 527 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 GUCY1A3Q02108 690 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 ASTE1Q2TB18 679 aaPredicted RBP26.09■■□□□ 1.77
TSKU-201ENST00000333090 COBLL1Q53SF7 1204 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 KRT25Q7Z3Z0 450 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 FBXO33Q7Z6M2 555 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 IQCKQ8N0W5 287 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 PAK2Q13177 524 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 NEK8Q86SG6 692 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 CELF1Q92879 486 aaKnown RBP26.09■■□□□ 1.77
TSKU-201ENST00000333090 GDF3Q9NR23 364 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 CAPN7Q9Y6W3 813 aa26.09■■□□□ 1.77
TSKU-201ENST00000333090 FTCDO95954 541 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 MNAT1P51948 309 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 RNASE9P60153 205 aaKnown RBP26.08■■□□□ 1.77
TSKU-201ENST00000333090 APBA1Q02410 837 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 RNF10Q8N5U6 811 aaKnown RBP26.08■■□□□ 1.77
TSKU-201ENST00000333090 ZMYND12Q9H0C1 365 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 CASZ1Q86V15 1759 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 SF3B2Q13435 895 aaKnown RBP26.08■■□□□ 1.77
TSKU-201ENST00000333090 FAM182BQ5T319 152 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 KCNV1Q6PIU1 500 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 TSKSQ9UJT2 592 aa26.08■■□□□ 1.77
TSKU-201ENST00000333090 COL16A1Q07092 1604 aaPredicted RBP26.08■■□□□ 1.77
TSKU-201ENST00000333090 SMCO2A6NFE2 343 aa26.08■■□□□ 1.76
TSKU-201ENST00000333090 PALMO75781 387 aa26.08■■□□□ 1.76
TSKU-201ENST00000333090 FGFR1OPO95684 399 aaKnown RBP26.08■■□□□ 1.76
TSKU-201ENST00000333090 LSP1P33241 339 aa26.08■■□□□ 1.76
TSKU-201ENST00000333090 HGSNATQ68CP4 663 aa26.08■■□□□ 1.76
TSKU-201ENST00000333090 OTUD6BQ8N6M0 293 aa26.08■■□□□ 1.76
TSKU-201ENST00000333090 KLRF2D3W0D1 207 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 C12orf60Q5U649 245 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 UNC13DQ70J99 1090 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 SLC44A5Q8NCS7 719 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 KRT12Q99456 494 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 BLOC1S4Q9NUP1 217 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 SSU72P8A0A1W2PR75 194 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 H0YHG0 523 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 LRRC41Q15345 812 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 KDM7AQ6ZMT4 941 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 TBCKQ8TEA7 893 aa26.07■■□□□ 1.76
TSKU-201ENST00000333090 PACSIN2Q9UNF0 486 aaPredicted RBP26.07■■□□□ 1.76
TSKU-201ENST00000333090 HIBADHP31937 336 aaKnown RBP26.06■■□□□ 1.76
TSKU-201ENST00000333090 GRB10Q13322 594 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 DZIP1Q86YF9 867 aaKnown RBP26.06■■□□□ 1.76
TSKU-201ENST00000333090 GUF1Q8N442 669 aaKnown RBP26.06■■□□□ 1.76
TSKU-201ENST00000333090 ANKS1AQ92625 1134 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 TMEM47Q9BQJ4 181 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 LAMB1P07942 1786 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 PHLPP1O60346 1717 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 NR1D1P20393 614 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 LRRC55Q6ZSA7 311 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 LINC00116Q8NCU8 138 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 GLIS3Q8NEA6 775 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 LARP4BQ92615 738 aaKnown RBP26.06■■□□□ 1.76
TSKU-201ENST00000333090 CDK5RAP3Q96JB5 506 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 RNF14Q9UBS8 474 aa26.06■■□□□ 1.76
TSKU-201ENST00000333090 PALM3A6NDB9 673 aaPredicted RBP26.05■■□□□ 1.76
TSKU-201ENST00000333090 TRADDQ15628 312 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms