RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 KCTD17Q8N5Z5 321 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 ANKRD36BP1Q96IX9 119 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 THAP12O43422 761 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 KRT76Q01546 638 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 DAAM1Q9Y4D1 1078 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■□□ 18.3
COL4A5-201ENST00000328300 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
COL4A5-201ENST00000328300 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 KIAA1586Q9HCI6 787 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 LDHAP00338 332 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 H2AFZP0C0S5 128 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 H2AFVQ71UI9 128 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 KMT5AQ9NQR1 393 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 RAB20Q9NX57 234 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 KIF20BQ96Q89 1820 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 PTK2Q05397 1052 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 LRRIQ4A6NIV6 560 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 NTSR2O95665 410 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 MRPS9P82933 396 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 SARNPP82979 210 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 RNF207Q6ZRF8 634 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 GINS2Q9Y248 185 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 STAM2O75886 525 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 MCPH1Q8NEM0 835 aa12.5□□□□□ -0.41
COL4A5-201ENST00000328300 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-201ENST00000328300 PVALEFA0A1B0GWK0 134 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 PRDX5P30044 214 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 RAD51AP2Q09MP3 1159 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 P3H4Q92791 437 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 TUBGCP2Q9BSJ2 902 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 SAR1BQ9Y6B6 198 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 MCM6Q14566 821 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 RESP18Q5W5W9 173 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 STAMQ92783 540 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 USP17L10C9JJH3 530 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 CEP104O60308 925 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 GH2P01242 217 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 KCNQ4P56696 695 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 PROM2Q8N271 834 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 TBC1D16Q8TBP0 767 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 LY9Q9HBG7 655 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 NEDD4P46934 1319 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 FAM186BQ8IYM0 893 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 PTPREP23469 700 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 NR2F2P24468 414 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 LMNB2Q03252 620 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 INO80BQ9C086 356 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-201ENST00000328300 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
COL4A5-201ENST00000328300 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 STXBP2Q15833 593 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 FANCLQ9NW38 375 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 MED7O43513 233 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 USP11P51784 963 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 BRD3Q15059 726 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms