RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DR1Q01658 176 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 TBC1D22AQ8WUA7 517 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 SYNMO15061 1565 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 NEK2P51955 445 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ARHGDIAP52565 204 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 GRM1Q13255 1194 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 MID2Q9UJV3 735 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 MT-ND3P03897 115 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 TMEM191BP0C7N4 346 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 E2F4Q16254 413 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 PCDHB4Q9Y5E5 795 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 INSRP06213 1382 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 PLS3P13797 630 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 CCDC92Q53HC0 331 aaPredicted RBP18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 CAPN11Q9UMQ6 739 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 CLCN6P51797 869 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 RBL2Q08999 1139 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■■■■■ 49.7
SMCHD1-201ENST00000320876 AK8Q96MA6 479 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ANO3Q9BYT9 981 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 TLK1Q9UKI8 766 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 TRIM33Q9UPN9 1127 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ZMYND10O75800 440 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 CASP8Q14790 479 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 USP28Q96RU2 1077 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 RPS6KC1Q96S38 1066 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PYGBP11216 843 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PCP11498 1178 aaKnown RBP18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 SCG2P13521 617 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 FAM186BQ8IYM0 893 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 GLE1Q53GS7 698 aaKnown RBP18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 TCP11X2Q5H9J9 407 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 KCTD6Q8NC69 237 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 LPXNO60711 386 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PTGDRQ13258 359 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PANX2Q96RD6 677 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 CHEK2O96017 543 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PCGF5Q86SE9 256 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 POLR3EQ9NVU0 708 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 NPR1P16066 1061 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PTPREP23469 700 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 MCUQ8NE86 351 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 ING2Q9H160 280 aa18.24■□□□□ 0.51
SMCHD1-201ENST00000320876 PRPF38AQ8NAV1 312 aaKnown RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 UIMC1Q96RL1 719 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 TEX12Q9BXU0 123 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 FAM170AA1A519 330 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 NR1H3Q13133 447 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 ICE2Q659A1 982 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 MCF2L2Q86YR7 1114 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 GYG2O15488 501 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 PPP6R2O75170 966 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 FLOT2Q14254 428 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 HIBCHQ6NVY1 386 aaPredicted RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 USP6NLQ92738 828 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 ARMCX5Q6P1M9 558 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 BBS5Q8N3I7 341 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 MRPL47Q9HD33 250 aaKnown RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 TMOD1P28289 359 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 SLC12A1Q13621 1099 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 AP2B1P63010 937 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 CPXCR1Q8N123 301 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 ENOX1Q8TC92 643 aaKnown RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 FOXP1Q9H334 677 aaPredicted RBP18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 SLC13A4Q9UKG4 626 aa18.23■□□□□ 0.51
SMCHD1-201ENST00000320876 CHGBP05060 677 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 NR2F2P24468 414 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 DNAAF3Q8N9W5 541 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ZNF653Q96CK0 615 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 RWDD2AQ9UIY3 292 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 TRAPPC10P48553 1259 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ATP6V0A1Q93050 837 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 GFM2Q969S9 779 aaKnown RBP18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 GNPATO15228 680 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 AFPP02771 609 aaKnown RBP18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 MMEP08473 750 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 MDM2Q00987 491 aaPredicted RBP18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 TFAP4Q01664 338 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms