RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 L3MBTL1Q9Y468 752 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 GAS7O60861 476 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 KRT16P08779 473 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 PTPREP23469 700 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 ARHGAP31Q2M1Z3 1444 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 IRAK4Q9NWZ3 460 aa13.17□□□□□ -0.3
PDE12-201ENST00000311180 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 DAB2P98082 770 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 SKA2Q8WVK7 121 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 ATP11BQ9Y2G3 1177 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 C16orf96A6NNT2 1141 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 PDE6AP16499 860 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 DR1Q01658 176 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 TMED2Q15363 201 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 NUGGCQ68CJ6 796 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 SPTLC3Q9NUV7 552 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 NME9Q86XW9 330 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 USP40Q9NVE5 1235 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GSNP06396 782 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDE12-201ENST00000311180 FLT4P35916 1363 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GPAA1O43292 621 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 CCDC22O60826 627 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 MFAP3P55082 362 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GUCY1A3Q02108 690 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 HP1BP3Q5SSJ5 553 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 GCC2Q8IWJ2 1684 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
PDE12-201ENST00000311180 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
PDE12-201ENST00000311180 BUB1O43683 1085 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 COPB1P53618 953 aaKnown RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 ZBTB8OSQ8IWT0 167 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 PRR23D1E9PI22 279 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 MBD4O95243 580 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 PRR23D2P0DMB1 279 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 SUFUQ9UMX1 484 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 H7C0C1 242 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 KRT19P08727 400 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 ATP5OP48047 213 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 TBCCQ15814 346 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 ZNF711Q9Y462 761 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 ADCY3O60266 1144 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 SERPINB1P30740 379 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 PLTPP55058 493 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDE12-201ENST00000311180 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 TERB1Q8NA31 727 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 PKD2L2Q9NZM6 624 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 B4E1Z4 1266 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
PDE12-201ENST00000311180 THAP11Q96EK4 314 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
PDE12-201ENST00000311180 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.31
PDE12-201ENST00000311180 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.31
PDE12-201ENST00000311180 RASSF7Q02833 373 aa13.15□□□□□ -0.31
PDE12-201ENST00000311180 PARD6BQ9BYG5 372 aa13.15□□□□□ -0.31
PDE12-201ENST00000311180 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.31
PDE12-201ENST00000311180 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 YIPF3Q9GZM5 350 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
PDE12-201ENST00000311180 HNRNPH2P55795 449 aaKnown RBP13.14□□□□□ -0.31
PDE12-201ENST00000311180 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 KLC2Q9H0B6 622 aa13.14□□□□□ -0.31
PDE12-201ENST00000311180 PANK4Q9NVE7 773 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms