RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RAVER2Q9HCJ3 691 aaKnown RBP9.43□□□□□ -0.9
CHD6-201ENST00000309279 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 ZSWIM8A7E2V4 1837 aa9.43□□□□□ -0.9
CHD6-201ENST00000309279 PNMA6FA0A0J9YX94 578 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 STRNO43815 780 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 ST18O60284 1047 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 COL6A1P12109 1028 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 IFNAR1P17181 557 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 FCGRTP55899 365 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 KCTD2Q14681 263 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 CDC37Q16543 378 aaPredicted RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 ME3Q16798 604 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 QRICH1Q2TAL8 776 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 TKFCQ3LXA3 575 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 GPR142Q7Z601 462 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 ABRAQ8N0Z2 381 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 CHST13Q8NET6 341 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 PIGSQ96S52 555 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 LRRC27Q9C0I9 530 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 GJD2Q9UKL4 321 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 PLXNB2O15031 1838 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 PPP1R11O60927 126 aaPredicted RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 TGFB3P10600 412 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 TERF1P54274 439 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 SCRN1Q12765 414 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 MAPRE1Q15691 268 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 PLEKHH3Q7Z736 793 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 LSM14AQ8ND56 463 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 USP6NLQ92738 828 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 ZSCAN31Q96LW9 406 aaPredicted RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 AMNQ9BXJ7 453 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 SLKQ9H2G2 1235 aaPredicted RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 GEMIN8Q9NWZ8 242 aaKnown RBP9.42□□□□□ -0.9
CHD6-201ENST00000309279 FBXO40Q9UH90 709 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 CCPG1Q9ULG6 757 aa9.42□□□□□ -0.9
CHD6-201ENST00000309279 CNTNAP5Q8WYK1 1306 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 ZNF236Q9UL36 1845 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 SLC15A5A6NIM6 579 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 TNPO2O14787 897 aaKnown RBP9.41□□□□□ -0.9
CHD6-201ENST00000309279 PRPF3O43395 683 aaKnown RBP9.41□□□□□ -0.9
CHD6-201ENST00000309279 RGS20O76081 388 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
CHD6-201ENST00000309279 PTPREP23469 700 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 HOXD10P28358 340 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 PEX19P40855 299 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 MCM2P49736 904 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 PRMT2P55345 433 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 TRAF1Q13077 416 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 GRB14Q14449 540 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 MORN1Q5T089 497 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 OTOP1Q7RTM1 612 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 FBXO11Q86XK2 927 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 CLEC4DQ8WXI8 215 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 COA7Q96BR5 231 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
CHD6-201ENST00000309279 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 BRCA2P51587 3418 aa9.41□□□□□ -0.9
CHD6-201ENST00000309279 ABCB11O95342 1321 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 CD2BP2O95400 341 aaKnown RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 LARGE1O95461 756 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 HOXC6P09630 235 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 FCER1AP12319 257 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 ALAS1P13196 640 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 STK3Q13188 491 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 ZSCAN30Q86W11 494 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 HOMER1Q86YM7 354 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 ARMC5Q96C12 935 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 ACAD9Q9H845 621 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 RNF146Q9NTX7 359 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 SEC63Q9UGP8 760 aaKnown RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 PCDHA1Q9Y5I3 950 aa9.4□□□□□ -0.9
CHD6-201ENST00000309279 MRPL42Q9Y6G3 142 aaKnown RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
CHD6-201ENST00000309279 DNAJC25-GNG10A0A024R161 153 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 SMAPO00193 183 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 CPLX1O14810 134 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 CTDNEP1O95476 244 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 FLT3LGP49771 235 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 GHRHRQ02643 423 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 PRKCZQ05513 592 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 ST3GAL1Q11201 340 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 PKN1Q16512 942 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms