RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 EXOC1Q9NV70 894 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 SPDYE3A6NKU9 549 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 FZD9O00144 591 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 PLA2G6O60733 806 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 FOSP01100 380 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 ASNSP08243 561 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 INPP5BP32019 993 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 CIITAP33076 1130 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 COPB1P53618 953 aaKnown RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 EHHADHQ08426 723 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 RBL2Q08999 1139 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 DGKZQ13574 1117 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 ANKRD40Q6AI12 368 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 MICALL2Q8IY33 904 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 DDX12PQ92771 950 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 EEF2KMTQ96G04 330 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 DHTKD1Q96HY7 919 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 CDK5RAP3Q96JB5 506 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 SRRTQ9BXP5 876 aaKnown RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 TAB2Q9NYJ8 693 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 CD2APQ9Y5K6 639 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 IGLV3-22A0A075B6J6 115 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 PVALEFA0A1B0GWK0 134 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 PSDA5PKW4 1024 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 RNF225M0QZC1 329 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 PSMA7O14818 248 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 NKRFO15226 690 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP47-201ENST00000305481 MARCH6O60337 910 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 RPS12P25398 132 aaKnown RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 GLIPR1L2Q4G1C9 344 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 TBC1D10BQ4KMP7 808 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 COBLL1Q53SF7 1204 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 GLIS3Q8NEA6 775 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 CCDC112Q8NEF3 446 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 DNAJC19Q96DA6 116 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 LTBP3Q9NS15 1303 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 E9PMD0 336 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 RIOK3O14730 519 aaKnown RBP7.32□□□□□ -1.24
USP47-201ENST00000305481 MSH4O15457 936 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 MED24O75448 989 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 GYPCP04921 128 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 CYP3A4P08684 503 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 UNC13DQ70J99 1090 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 NLGN2Q8NFZ4 835 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 CHURC1Q8WUH1 139 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 P2RX5Q93086 422 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 BAG1Q99933 345 aaPredicted RBP7.32□□□□□ -1.24
USP47-201ENST00000305481 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 THAP9Q9H5L6 903 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 CNOT7Q9UIV1 285 aaKnown RBP7.32□□□□□ -1.24
USP47-201ENST00000305481 KIAA1024Q9UPX6 916 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 POTEB3A0JP26 581 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 POTECB2RU33 542 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 N4BP3O15049 544 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 TBX3O15119 743 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 CCNE1P24864 410 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 GTF2F1P35269 517 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP47-201ENST00000305481 FXR1P51114 621 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP47-201ENST00000305481 PTPN14Q15678 1187 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 POTEBQ6S5H4 581 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 REXO1L1PQ8IX06 675 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 CPLX3Q8WVH0 158 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 TSC1Q92574 1164 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 HACL1Q9UJ83 578 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 VAV3Q9UKW4 847 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 ZNF536O15090 1300 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 ATAD5Q96QE3 1844 aa7.32□□□□□ -1.24
USP47-201ENST00000305481 STX10O60499 249 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CFBP00751 764 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 SPAG1Q07617 926 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 STIM1Q13586 685 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 FILIP1LQ4L180 1135 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CENPPQ6IPU0 288 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CATSPER3Q86XQ3 398 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CREBRFQ8IUR6 639 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CSGALNACT2Q8N6G5 542 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 ZNF507Q8TCN5 953 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 DEFB129Q9H1M3 183 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 FEM1BQ9UK73 627 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 GJA3Q9Y6H8 435 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 ITIH6Q6UXX5 1313 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 ZNF541Q9H0D2 1346 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 AKR1B15C9JRZ8 316 aaPredicted RBP7.31□□□□□ -1.24
USP47-201ENST00000305481 ARHGAP6O43182 974 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 EEF1GP26641 437 aaKnown RBP7.31□□□□□ -1.24
USP47-201ENST00000305481 CASP14P31944 242 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 PSMC6P62333 389 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 ARSHQ5FYA8 562 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 NBPF12Q5TAG4 269 aaPredicted RBP7.31□□□□□ -1.24
USP47-201ENST00000305481 SAMD1Q6SPF0 538 aaPredicted RBP7.31□□□□□ -1.24
USP47-201ENST00000305481 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms