RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
ABCA3-201ENST00000301732 DAAM1Q9Y4D1 1078 aa13.42□□□□□ -0.26
ABCA3-201ENST00000301732 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 GCP02774 474 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 SLMAPQ14BN4 828 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 BBS9Q3SYG4 887 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 RGS9BPQ6ZS82 235 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 LARGE2Q8N3Y3 721 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 RNF8O76064 485 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 SEC24DO94855 1032 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 RFX1P22670 979 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 ART3Q13508 389 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 PLBD2Q8NHP8 589 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 CCDC90BQ9GZT6 254 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 IRAK4Q9NWZ3 460 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 ZBED4O75132 1171 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 NSUN2Q08J23 767 aaKnown RBP eCLIP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 H3BRJ5 948 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 PDE8AO60658 829 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 CASP8Q14790 479 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 LRRC36Q1X8D7 754 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 ODR4Q5SWX8 454 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 NR2F2P24468 414 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 HSPA2P54652 639 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 PASD1Q8IV76 773 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 MTRQ99707 1265 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-201ENST00000301732 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
ABCA3-201ENST00000301732 A6NJR5 290 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 M0R2C6 588 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 NCK2O43639 380 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 CPP00450 1065 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 KRT1P04264 644 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 DARS2Q6PI48 645 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 TRIML2Q8N7C3 387 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 PNMA1Q8ND90 353 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 CEP19Q96LK0 163 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 OR52Z1P0C646 297 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 SMAD5Q99717 465 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 LUC7L3O95232 432 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 TSPY1Q01534 308 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 MAP3K21Q5TCX8 1036 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 COA7Q96BR5 231 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 NHEJ1Q9H9Q4 299 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 FAM8A1Q9UBU6 413 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 GCKRQ14397 625 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 WARS2Q9UGM6 360 aaKnown RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 CCNL1Q9UK58 526 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 WDR7Q9Y4E6 1490 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 NR1D1P20393 614 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 PPP1R2P41236 205 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-201ENST00000301732 GADL1Q6ZQY3 521 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 PLAAQ9Y263 795 aa13.4□□□□□ -0.26
ABCA3-201ENST00000301732 ESRRAP11474 423 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 ZNF18P17022 549 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 TCP1P17987 556 aaKnown RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 IQCB1Q15051 598 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 PCGF5Q86SE9 256 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 DEPDC1BQ8WUY9 529 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 ANTXR1Q9H6X2 564 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 GOLGA8CPA6NN73 597 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 PRKAB2O43741 272 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 SPAG7O75391 227 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 SYF2O95926 243 aaKnown RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 UBE2SQ16763 222 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 KIF19Q2TAC6 998 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 EPHB1P54762 984 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 KCNA1Q09470 495 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 MFSD14BQ5SR56 506 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms