RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 KANSL2Q9H9L4 492 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 UTRNP46939 3433 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 hCG_1984214I3L0E3 225 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 CDC37Q16543 378 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 ZNF713Q8N859 430 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 STK17AQ9UEE5 414 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 KIAA1024Q9UPX6 916 aa17.6■□□□□ 0.41
NCKIPSD-201ENST00000294129 POTEB3A0JP26 581 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 POTECB2RU33 542 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 HERVK_113P62684 666 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 HHIPL2Q6UWX4 724 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 CAPZA3Q96KX2 299 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 DNAJC7Q99615 494 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 DUSP10Q9Y6W6 482 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 EPHB6O15197 1021 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 SRGAP2O75044 1071 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 RABGGTAQ92696 567 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 POLD4Q9HCU8 107 aa17.59■□□□□ 0.41
NCKIPSD-201ENST00000294129 FOCADQ5VW36 1801 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 ECE2O60344 883 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 IPO7O95373 1038 aaKnown RBP17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 ICA1Q05084 483 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 AOC3Q16853 763 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 FGFBP2Q9BYJ0 223 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 NHEJ1Q9H9Q4 299 aaPredicted RBP17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.41
NCKIPSD-201ENST00000294129 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 LACRTQ9GZZ8 138 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 RCCD1A6NED2 376 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 SASH3O75995 380 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 PLA2G4AP47712 749 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 PRR16Q569H4 304 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 CENPPQ6IPU0 288 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 JAKMIP2Q96AA8 810 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 ARFGAP3Q9NP61 516 aa17.58■□□□□ 0.4
NCKIPSD-201ENST00000294129 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 MEIS1O00470 390 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 KRT18P05783 430 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 CEP112Q8N8E3 955 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 DRC1Q96MC2 740 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 CLK2P49760 499 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 PDIA5Q14554 519 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZDHHC15Q96MV8 337 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 PANK4Q9NVE7 773 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
NCKIPSD-201ENST00000294129 TRAF5O00463 557 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 HOXA13P31271 388 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 COASYQ13057 564 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 PPP4R3AQ6IN85 833 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 PNKPQ96T60 521 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 TTYH3Q9C0H2 523 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 MYO6Q9UM54 1294 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CTAGE15A4D2H0 777 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 POTEFA5A3E0 1075 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 ATP1A1P05023 1023 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 POTEIP0CG38 1075 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CTAGE8P0CG41 777 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CYLC1P35663 651 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZBED6P86452 979 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 POTEGQ6S5H5 508 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 POTEEQ6S8J3 1075 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CTAGE6Q86UF2 777 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CTAGE4Q8IX94 777 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 NOA1Q8NC60 698 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
NCKIPSD-201ENST00000294129 F5H6K3 240 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 KLRC3Q07444 240 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 CCDC42Q96M95 316 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 CRACR2AQ9BSW2 395 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 DEF6Q9H4E7 631 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 GH2P01242 217 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 TERF2Q15554 542 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 CCDC40Q4G0X9 1142 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 TMEM119Q4V9L6 283 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 RRAGAQ7L523 313 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 GPBP1Q86WP2 473 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 MYOCDQ8IZQ8 938 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 NUP58Q9BVL2 599 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms