RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TNFAIP2Q03169 654 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MUM1Q2TAK8 710 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TADA2BQ86TJ2 420 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PDZD8Q8NEN9 1154 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MRRFQ96E11 262 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NRBF2Q96F24 287 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 LRRC37BQ96QE4 947 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ACCSQ96QU6 501 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RNF26Q9BY78 433 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 EFCC1Q9HA90 598 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RNF123Q5XPI4 1314 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 CLASP1Q7Z460 1538 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NUP153P49790 1475 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PLEKHG1Q9ULL1 1385 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PRPSAP2O60256 369 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 KRT37O76014 449 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 CIAO1O76071 339 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ERCC3P19447 782 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PHKA2P46019 1235 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TSPY1Q01534 308 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 EXOC3L4Q17RC7 722 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 C10orf76Q5T2E6 689 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TYW1BQ6NUM6 668 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PATL1Q86TB9 770 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RAB42Q8N4Z0 105 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MCUQ8NE86 351 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MCPH1Q8NEM0 835 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 DHTKD1Q96HY7 919 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PGBD1Q96JS3 809 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 KIFC3Q9BVG8 833 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SRPRBQ9Y5M8 271 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PDE4DIPQ5VU43 2346 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TAF5LO75529 589 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ACTN1P12814 892 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 NPR1P16066 1061 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 TAC1P20366 129 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ESRRGP62508 458 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 TAF1BQ53T94 588 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 CCDC13Q8IYE1 715 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 LZICQ8WZA0 190 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 SPDL1Q96EA4 605 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ACAP3Q96P50 834 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 UPF3AQ9H1J1 476 aaKnown RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 GPR108Q9NPR9 543 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 TBC1D7Q9P0N9 293 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 SUCLA2Q9P2R7 463 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 STAP1Q9ULZ2 295 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 KCNH4Q9UQ05 1017 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF148Q9UQR1 794 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 USP17L12C9JPN9 530 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 USP17L21D6R901 530 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 H7C0C1 242 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 FDX1P10109 184 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 PAMP19021 973 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 RXRBP28702 533 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ATP5OP48047 213 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 THOC5Q13769 683 aaKnown RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 POLA2Q14181 598 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 SLMAPQ14BN4 828 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 PDXDC1Q6P996 788 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 DYMQ7RTS9 669 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 DNAAF3Q8N9W5 541 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 ZFYVE16Q7Z3T8 1539 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 USP19O94966 1318 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 GOLGA8JA6NMD2 632 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 KDM1AO60341 852 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 IFRD2Q12894 506 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 KIAA1755Q5JYT7 1200 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 FAM186BQ8IYM0 893 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 FBXL13Q8NEE6 735 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 GJA10Q969M2 543 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 CCDC127Q96BQ5 260 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 MTBPQ96DY7 904 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 RABEP2Q9H5N1 569 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 STRIP2Q9ULQ0 834 aa4.4□□□□□ -1.7
SCN3A-201ENST00000283254 PACSIN2Q9UNF0 486 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-201ENST00000283254 IGSF3O75054 1194 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ABCB4P21439 1286 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 NR2F2P24468 414 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MXI1P50539 228 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF75DP51815 510 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 CLNS1AP54105 237 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 SPOPLQ6IQ16 392 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TOGARAM2Q6ZUX3 1019 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 DDX27Q96GQ7 796 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MTRQ99707 1265 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM15Q9C019 465 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 SEPT9Q9UHD8 586 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 GSTA4O15217 222 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TFAMQ00059 246 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MORC3Q14149 939 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 KHDRBS2Q5VWX1 349 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 HOMEZQ8IX15 550 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TTLL6Q8N841 843 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ZBTB38Q8NAP3 1195 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms