RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ZNF142P52746 1687 aaPredicted RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 RPRD2Q5VT52 1461 aaKnown RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 RRBP1Q9P2E9 1410 aaKnown RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 SLC22A31A6NKX4 558 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 PDPK1O15530 556 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 AKAP10O43572 662 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 PRNPP04156 253 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 SPINK2P20155 84 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 CCNFP41002 786 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 GP2P55259 537 aaKnown RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 FAM193AP78312 1265 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 IKZF1Q13422 519 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 CLEC16AQ2KHT3 1053 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 ALFQ53S48 1182 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 FAM83BQ5T0W9 1011 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 SLC4A10Q6U841 1118 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 SMAP1Q8IYB5 467 aaPredicted RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 CELF2-AS1Q8N7Q2 184 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 CCDC89Q8N998 374 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 PIWIL2Q8TC59 973 aaKnown RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 THAP3Q8WTV1 239 aaPredicted RBP5.59□□□□□ -1.51
CD44-202ENST00000278385 DHRS1Q96LJ7 313 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 KIF2CQ99661 725 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 GPATCH2Q9NW75 528 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 CCDC39Q9UFE4 941 aa5.59□□□□□ -1.51
CD44-202ENST00000278385 VWDEQ8N2E2 1590 aa5.59□□□□□ -1.52
CD44-202ENST00000278385 CPS1P31327 1500 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 SCAF11Q99590 1463 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 ARHGAP23Q9P227 1491 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 BICDL2A1A5D9 508 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 RGS13O14921 159 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 SLC26A4O43511 780 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 RNASEH2AO75792 299 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 MED26O95402 600 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 ASMTLO95671 621 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 KCNA6P17658 529 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CRKP46108 304 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 IRAK1P51617 712 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 RBM10P98175 930 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 NFKB2Q00653 900 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CLCQ05315 142 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 PLCL1Q15111 1095 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 C22orf34Q6ZV56 151 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 NLRC3Q7RTR2 1065 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 NGDNQ8NEJ9 315 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 PI4K2BQ8TCG2 481 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 RNF141Q8WVD5 230 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 TMEM40Q8WWA1 233 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CCDC120Q96HB5 630 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 HEXIM2Q96MH2 286 aaKnown RBP5.58□□□□□ -1.52
CD44-202ENST00000278385 ASPNQ9BXN1 380 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CD2APQ9Y5K6 639 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 SLIT1O75093 1534 aa5.58□□□□□ -1.52
CD44-202ENST00000278385 CROCC2H7BZ55 1655 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 DEPDC5O75140 1603 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 PRRT4C9JH25 899 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 CLEC3AO75596 197 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 TCEA3O75764 348 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 F2P00734 622 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 IFIT2P09913 472 aaKnown RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 ZNF865P0CJ78 1059 aaPredicted RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 NEK2P51955 445 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 EIF6P56537 245 aaKnown RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 DDR2Q16832 855 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 NXNQ6DKJ4 435 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 THAP5Q7Z6K1 395 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 DGKHQ86XP1 1220 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 TCEAL8Q8IYN2 117 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 RIN3Q8TB24 985 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 BAHD1Q8TBE0 780 aaPredicted RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 BCL7CQ8WUZ0 217 aaPredicted RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 ANAPC16Q96DE5 110 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 SLC26A8Q96RN1 970 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 ASPSCR1Q9BZE9 553 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 CDH19Q9H159 772 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 NOL7Q9UMY1 257 aaKnown RBP5.57□□□□□ -1.52
CD44-202ENST00000278385 SLC12A7Q9Y666 1083 aa5.57□□□□□ -1.52
CD44-202ENST00000278385 CLSPNQ9HAW4 1339 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 NEURL4Q96JN8 1562 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 SSU72P8A0A1W2PR75 194 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 DYTNA2CJ06 578 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 BIN1O00499 593 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 SMAD7O15105 426 aaKnown RBP5.56□□□□□ -1.52
CD44-202ENST00000278385 SRGNP10124 158 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 MYCLP1P12525 358 aaPredicted RBP5.56□□□□□ -1.52
CD44-202ENST00000278385 SOX5P35711 763 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 HTR3AP46098 478 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 GUCY2FP51841 1108 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 PURAQ00577 322 aaKnown RBP5.56□□□□□ -1.52
CD44-202ENST00000278385 MLC1Q15049 377 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 CCDC96Q2M329 555 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 TNNI3KQ59H18 835 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 CDCP2Q5VXM1 449 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 OVOS1Q6IE37 1185 aa5.56□□□□□ -1.52
CD44-202ENST00000278385 OR6P1Q8NGX9 317 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms