RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PCDHA5Q9Y5H7 936 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 A0A0G2JMZ2 1700 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 SLC26A4O43511 780 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 STAT6P42226 847 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 SARSP49591 514 aaKnown RBP15.9■□□□□ 0.14
SS18-201ENST00000269137 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
SS18-201ENST00000269137 CEP55Q53EZ4 464 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 NAALADL2Q58DX5 795 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 C2orf69Q8N8R5 385 aa15.9■□□□□ 0.14
SS18-201ENST00000269137 ASCC2Q9H1I8 757 aaPredicted RBP15.9■□□□□ 0.14
SS18-201ENST00000269137 MEIS1O00470 390 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
SS18-201ENST00000269137 NLRP12P59046 1061 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 CHST13Q8NET6 341 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 ACAD9Q9H845 621 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 MAGEF1Q9HAY2 307 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.13
SS18-201ENST00000269137 MSH4O15457 936 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 SMC2O95347 1197 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 KRT79Q5XKE5 535 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 GPAT2Q6NUI2 795 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 SLC30A10Q6XR72 485 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 NIPA1Q7RTP0 329 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
SS18-201ENST00000269137 POTEMA6NI47 508 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 ITGBL1O95965 494 aaPredicted RBP15.88■□□□□ 0.13
SS18-201ENST00000269137 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 PLCG1P19174 1290 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 ZNF165P49910 485 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 HERVK_113P62684 666 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 SETQ01105 290 aaPredicted RBP15.88■□□□□ 0.13
SS18-201ENST00000269137 BAATQ14032 418 aaPredicted RBP15.88■□□□□ 0.13
SS18-201ENST00000269137 PCNX4Q63HM2 1172 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 XRRA1Q6P2D8 792 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 NSMFQ6X4W1 530 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 PLA2G4DQ86XP0 818 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 RIOX2Q8IUF8 465 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 GRAMD1CQ8IYS0 662 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 TRIML1Q8N9V2 468 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 TAAR1Q96RJ0 339 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 NAT10Q9H0A0 1025 aaKnown RBP15.88■□□□□ 0.13
SS18-201ENST00000269137 CBX8Q9HC52 389 aa15.88■□□□□ 0.13
SS18-201ENST00000269137 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
SS18-201ENST00000269137 MYL1P05976 194 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 BCRP11274 1271 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 OSBPP22059 807 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 AFMP43652 599 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 UBXN2AP68543 259 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 SPIRE1Q08AE8 756 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 DPYDQ12882 1025 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 PLS1Q14651 629 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 HYIQ5T013 277 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 GJA10Q969M2 543 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 RMDN3Q96TC7 470 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 MTRQ99707 1265 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 MXRA8Q9BRK3 442 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 BTBD7Q9P203 1132 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 BIN1O00499 593 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 CETPP11597 493 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 GTF2A2P52657 109 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 GRB10Q13322 594 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 C11orf57Q6ZUT1 292 aaPredicted RBP15.87■□□□□ 0.13
SS18-201ENST00000269137 SNX29Q8TEQ0 813 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 SLC5A5Q92911 643 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 GSDMAQ96QA5 445 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 BPIFA3Q9BQP9 254 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 SPATC1LQ9H0A9 340 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 A1CFQ9NQ94 594 aaKnown RBP15.87■□□□□ 0.13
SS18-201ENST00000269137 PXMP2Q9NR77 195 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 CYP39A1Q9NYL5 469 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 SLC45A1Q9Y2W3 748 aa15.87■□□□□ 0.13
SS18-201ENST00000269137 A0A087WWV3 80 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 IQCB1Q15051 598 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 PGM5Q15124 567 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 DPCR1Q3MIW9 517 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 TMEM119Q4V9L6 283 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 CST9Q5W186 159 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 IL31RAQ8NI17 732 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 LRRC15Q8TF66 581 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 MS4A4AQ96JQ5 239 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 PNMA5Q96PV4 448 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 PDCD2LQ9BRP1 358 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 UBIAD1Q9Y5Z9 338 aa15.86■□□□□ 0.13
SS18-201ENST00000269137 TRPM7Q96QT4 1865 aa15.85■□□□□ 0.13
SS18-201ENST00000269137 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
SS18-201ENST00000269137 CNMDO75829 334 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms