RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 TRAPPC11Q7Z392 1133 aa9.26□□□□□ -0.93
TNPO3-201ENST00000265388 IRF2BP1Q8IU81 584 aa9.26□□□□□ -0.93
TNPO3-201ENST00000265388 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
TNPO3-201ENST00000265388 GJA10Q969M2 543 aa9.26□□□□□ -0.93
TNPO3-201ENST00000265388 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
TNPO3-201ENST00000265388 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
TNPO3-201ENST00000265388 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
TNPO3-201ENST00000265388 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 H0YHG0 523 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 DOK7Q18PE1 504 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 USH1GQ495M9 461 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 KLRC4O43908 158 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 PPP1R12BO60237 982 aaPredicted RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 NT5C2P49902 561 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 FKBP3Q00688 224 aaKnown RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 PPARDQ03181 441 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 PRPF4BQ13523 1007 aaKnown RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 ODF2Q5BJF6 829 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 CFAP58Q5T655 872 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 RAD54LQ92698 747 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 SELENOOQ9BVL4 669 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 NT5C3AQ9H0P0 336 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 SMARCAL1Q9NZC9 954 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 COL4A3BPQ9Y5P4 624 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 CNTNAP4Q9C0A0 1308 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 ANO9A1A5B4 782 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 TTLL1O95922 423 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 FTCDO95954 541 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 AKR1B1P15121 316 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 LRRC63Q05C16 580 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
TNPO3-201ENST00000265388 C16orf86Q6ZW13 317 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 PTF1AQ7RTS3 328 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 RAB21Q9UL25 225 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 KDM3AQ9Y4C1 1321 aa9.25□□□□□ -0.93
TNPO3-201ENST00000265388 ZEB2O60315 1214 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 KIAA0754O94854 1291 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 SERPINB2P05120 415 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 ADAM9Q13443 819 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 PRR16Q569H4 304 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.934e-7■□□□□ 9.1
TNPO3-201ENST00000265388 FAM107BQ9H098 131 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 SERPINB13Q9UIV8 391 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 REXO2Q9Y3B8 237 aaKnown RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 DISP2A7MBM2 1401 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 BAZ2AQ9UIF9 1905 aaKnown RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 PVALEFA0A1B0GWK0 134 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 LRRIQ3A6PVS8 624 aaPredicted RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 E9PMD0 336 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 SLC37A4O43826 429 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TOM1O60784 492 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 GUCY2FP51841 1108 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 KIAA0753Q2KHM9 967 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TRMT1LQ7Z2T5 733 aaKnown RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TMC4Q7Z404 712 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 GUF1Q8N442 669 aaKnown RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TBC1D5Q92609 795 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 FAM53CQ9NYF3 392 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TCEAL9Q9UHQ7 104 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 PCDHA1Q9Y5I3 950 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 NUP98P52948 1817 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 ANKRD65E5RJM6 399 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 GGCXP38435 758 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 EHHADHQ08426 723 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 COASYQ13057 564 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 GRB10Q13322 594 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 TTC19Q6DKK2 380 aaPredicted RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 WDR59Q6PJI9 974 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 CCDC155Q8N6L0 562 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 RRP15Q9Y3B9 282 aaKnown RBP9.24□□□□□ -0.93
TNPO3-201ENST00000265388 MYH3P11055 1940 aa9.24□□□□□ -0.93
TNPO3-201ENST00000265388 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 hCG_1984214I3L0E3 225 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 PPP4CP60510 307 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 USP17L6PQ6QN14 398 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 IFT20Q8IY31 132 aa9.23□□□□□ -0.93
TNPO3-201ENST00000265388 ZNF713Q8N859 430 aaPredicted RBP9.23□□□□□ -0.93
TNPO3-201ENST00000265388 FAM133AQ8N9E0 248 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms