RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 BCL9LQ86UU0 1499 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 FLT1P17948 1338 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 CARSP49589 748 aaKnown RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 EHHADHQ08426 723 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 REXO1Q8N1G1 1221 aaKnown RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 EYA3Q99504 573 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 FAM169AQ9Y6X4 670 aa13.72□□□□□ -0.21
CHMP3-201ENST00000263856 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
CHMP3-201ENST00000263856 ZC3H4Q9UPT8 1303 aaKnown RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 SF3A3Q12874 501 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 DGKHQ86XP1 1220 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 LRRC47Q8N1G4 583 aaKnown RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 PLCH1Q4KWH8 1693 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 FGRP09769 529 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 PICALMQ13492 652 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 UBE2SQ16763 222 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 CFAP58Q5T655 872 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 FBXW10Q5XX13 1052 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 HAUS3Q68CZ6 603 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 TMED8Q6PL24 325 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 AENQ8WTP8 325 aaKnown RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 ZIM3Q96PE6 472 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 LSM14BQ9BX40 385 aaKnown RBP13.71□□□□□ -0.21
CHMP3-201ENST00000263856 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
CHMP3-201ENST00000263856 OPA1O60313 960 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 PALMO75781 387 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 ERLIN2O94905 339 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 FAM153BP0C7A2 387 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 TCP1P17987 556 aaKnown RBP13.71□□□□□ -0.22
CHMP3-201ENST00000263856 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.22
CHMP3-201ENST00000263856 TRADDQ15628 312 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 MAN2A1Q16706 1144 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 TMEM266Q2M3C6 531 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 FAM153CQ494X1 144 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 TADA2BQ86TJ2 420 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 TSG101Q99816 390 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 FAM153AQ9UHL3 310 aa13.71□□□□□ -0.22
CHMP3-201ENST00000263856 SLC37A4O43826 429 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
CHMP3-201ENST00000263856 GNA11P29992 359 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 EPHB4P54760 987 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-201ENST00000263856 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 DDX12PQ92771 950 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 TTMPQ5BVD1 217 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
CHMP3-201ENST00000263856 MMTAG2Q9BU76 263 aaKnown RBP13.7□□□□□ -0.22
CHMP3-201ENST00000263856 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 F8W031 263 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-201ENST00000263856 RPS6KA5O75582 802 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 GLI1P08151 1106 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 GRB10Q13322 594 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 NNTQ13423 1086 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
CHMP3-201ENST00000263856 C7orf25Q9BPX7 421 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 BAG3O95817 575 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
CHMP3-201ENST00000263856 PACSIN1Q9BY11 444 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 CASZ1Q86V15 1759 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 LRP5O75197 1615 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 NPHP3-ACAD11A0A0J9YXS1 232 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 M0R2N6 131 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 MYL1P05976 194 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 EFCAB13Q8IY85 973 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 TEX11Q8IYF3 940 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 AK8Q96MA6 479 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 TLR10Q9BXR5 811 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 SIK3Q9Y2K2 1263 aa13.69□□□□□ -0.22
CHMP3-201ENST00000263856 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 KIAA0754O94854 1291 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 MNAT1P51948 309 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 SFMBT2Q5VUG0 894 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
CHMP3-201ENST00000263856 MMGT1Q8N4V1 131 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
CHMP3-201ENST00000263856 MARCH10Q8NA82 808 aaPredicted RBP13.68□□□□□ -0.22
CHMP3-201ENST00000263856 A0A1B0GUL6 1792 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms