RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MARCH6O60337 910 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 HERVK_113P62684 666 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 PLS1Q14651 629 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 NSMFQ6X4W1 530 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 RNF214Q8ND24 703 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 CYP2W1Q8TAV3 490 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 GJA10Q969M2 543 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 CCDC34Q96HJ3 373 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 FAM20AQ96MK3 541 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 ACAD9Q9H845 621 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 CCDC39Q9UFE4 941 aa25.82■■□□□ 1.72
SMARCB1-201ENST00000263121 TRPM7Q96QT4 1865 aa25.81■■□□□ 1.72
SMARCB1-201ENST00000263121 POTEMA6NI47 508 aa25.81■■□□□ 1.72
SMARCB1-201ENST00000263121 ANO6Q4KMQ2 910 aa25.81■■□□□ 1.72
SMARCB1-201ENST00000263121 CST9Q5W186 159 aa25.81■■□□□ 1.72
SMARCB1-201ENST00000263121 PAGE5Q96GU1 130 aa25.81■■□□□ 1.72
SMARCB1-201ENST00000263121 MSH4O15457 936 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 PRR29P0C7W0 189 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 BAATQ14032 418 aaPredicted RBP25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 CEP55Q53EZ4 464 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 NAALADL2Q58DX5 795 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 RIOX2Q8IUF8 465 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 GRAMD1CQ8IYS0 662 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 MS4A4AQ96JQ5 239 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 TAAR1Q96RJ0 339 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 OSBPP22059 807 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 STAT6P42226 847 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 RRAGBQ5VZM2 374 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 CHST13Q8NET6 341 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 ANO10Q9NW15 660 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 PCDHA5Q9Y5H7 936 aa25.8■■□□□ 1.72
SMARCB1-201ENST00000263121 CNMDO75829 334 aa25.79■■□□□ 1.72
SMARCB1-201ENST00000263121 NT5DC1Q5TFE4 455 aa25.79■■□□□ 1.72
SMARCB1-201ENST00000263121 PCNX4Q63HM2 1172 aa25.79■■□□□ 1.72
SMARCB1-201ENST00000263121 IL31RAQ8NI17 732 aa25.79■■□□□ 1.72
SMARCB1-201ENST00000263121 MEIS1O00470 390 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 CAVIN2O95810 425 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 CETPP11597 493 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 SARSP49591 514 aaKnown RBP25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 GTF2A2P52657 109 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 SPIRE1Q08AE8 756 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 PLA2G4DQ86XP0 818 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 RASSF8Q8NHQ8 419 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 SPATA20Q8TB22 786 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 FAM200AQ8TCP9 573 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 MXRA8Q9BRK3 442 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 SPATC1LQ9H0A9 340 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 DNAJC25Q9H1X3 360 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 A1CFQ9NQ94 594 aaKnown RBP25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 PXMP2Q9NR77 195 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 CYP39A1Q9NYL5 469 aa25.78■■□□□ 1.72
SMARCB1-201ENST00000263121 A0A087WWV3 80 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 PEX10O60683 326 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 PLCG1P19174 1290 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 NLRP12P59046 1061 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 SETQ01105 290 aaPredicted RBP25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 LRRC15Q8TF66 581 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 UIMC1Q96RL1 719 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 RMDN3Q96TC7 470 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 MTRQ99707 1265 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 CUEDC2Q9H467 287 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 ZBTB48P10074 688 aaPredicted RBP25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 AFMP43652 599 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 GRB10Q13322 594 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 PGM5Q15124 567 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 SPRYD7Q5W111 196 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 KRT79Q5XKE5 535 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 C11orf57Q6ZUT1 292 aaPredicted RBP25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 NIPA1Q7RTP0 329 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 CALML4Q96GE6 196 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 SLC45A1Q9Y2W3 748 aa25.77■■□□□ 1.72
SMARCB1-201ENST00000263121 BIN1O00499 593 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 DPYDQ12882 1025 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 ZRSR1Q15695 479 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 SNX29Q8TEQ0 813 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 SLC5A5Q92911 643 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 PNMA5Q96PV4 448 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 PURBQ96QR8 312 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 NUDT12Q9BQG2 462 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 PDCD2LQ9BRP1 358 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 MAGEF1Q9HAY2 307 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 RBPJLQ9UBG7 517 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 FBXO40Q9UH90 709 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 VAV3Q9UKW4 847 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 UBIAD1Q9Y5Z9 338 aa25.76■■□□□ 1.71
SMARCB1-201ENST00000263121 SLC26A4O43511 780 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 BCRP11274 1271 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 ITGB5P18084 799 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 EIF2AK2P19525 551 aaKnown RBP25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 MRPS9P82933 396 aaKnown RBP25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 SMARCE1Q969G3 411 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 PLIN2Q99541 437 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 PAGR1Q9BTK6 254 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 PNMA3Q9UL41 463 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 LCTP09848 1927 aa25.75■■□□□ 1.71
SMARCB1-201ENST00000263121 CCL15-CCL14A0A0B4J2E2 113 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 CCL15Q16663 113 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 UVSSAQ2YD98 709 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 DPCR1Q3MIW9 517 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 TMEM119Q4V9L6 283 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms