RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 GOLGA8OA6NCC3 632 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 GOLGA8NF8WBI6 632 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 BNIP3LO60238 219 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 TCP1P17987 556 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 BTDP43251 543 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 PIP4K2CQ8TBX8 421 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 PI4K2BQ8TCG2 481 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 KIAA1024Q9UPX6 916 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 ZMYM6O95789 1325 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 MYO1FO00160 1098 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 LUC7L3O95232 432 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 DPP9Q86TI2 863 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 METTL23Q86XA0 190 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 LMCD1Q9NZU5 365 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 MAPK4P31152 587 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 TFDP1Q14186 410 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 ANGPTL8Q6UXH0 198 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 CNOT6LQ96LI5 555 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 BCAMP50895 628 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 CDCA7Q9BWT1 371 aaPredicted RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 LARSQ9P2J5 1176 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 ITM2BQ9Y287 266 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 NPR1P16066 1061 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 IFT88Q13099 833 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 SPICE1Q8N0Z3 855 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 ABTB1Q969K4 478 aaPredicted RBP15.5■□□□□ 0.07
CUX2-201ENST00000261726 FAM8A1Q9UBU6 413 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 SCG2P13521 617 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 TCP11X2Q5H9J9 407 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 ZMYND10O75800 440 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 GOLGA8FQ08AF8 430 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 GOLGA8DPQ0D2H9 430 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 KRT33BQ14525 404 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 INTUQ9ULD6 942 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 TNKSO95271 1327 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 ADD1P35611 737 aaKnown RBP15.5■□□□□ 0.07
CUX2-201ENST00000261726 MSH2P43246 934 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
CUX2-201ENST00000261726 SOX5P35711 763 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
CUX2-201ENST00000261726 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 CCDC197Q8NCU1 140 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 CLIC4Q9Y696 253 aa15.5■□□□□ 0.07
CUX2-201ENST00000261726 LRRN2O75325 713 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 KRT1P04264 644 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 BASP1P80723 227 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 DCAF15Q66K64 600 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 SPOPLQ6IQ16 392 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 KIF1BO60333 1816 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 ATP10AO60312 1499 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 DARS2Q6PI48 645 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 EXT2Q93063 718 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 THEGQ9P2T0 379 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 WDR91A4D1P6 747 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 NCF2P19878 526 aaPredicted RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 ATICP31939 592 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 AOC3Q16853 763 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 KRT26Q7Z3Y9 468 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 CCDC124Q96CT7 223 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 NEO1Q92859 1461 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 EFCAB8A8MWE9 144 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 CFLARO15519 480 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 SH3BGRP55822 239 aaPredicted RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 PTPN21Q16825 1174 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 SLFN13Q68D06 897 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 ARHGEF18Q6ZSZ5 1173 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 INO80B-WBP1J3KQ70 363 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 NDUFA8P51970 172 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 PTGDRQ13258 359 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 E2F5Q15329 346 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 SGO2Q562F6 1265 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 LRCH2Q5VUJ6 765 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 TTC30AQ86WT1 665 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 FBXL13Q8NEE6 735 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 GANCQ8TET4 914 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 CEP19Q96LK0 163 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 INO80BQ9C086 356 aaPredicted RBP15.49■□□□□ 0.07
CUX2-201ENST00000261726 TRPM2O94759 1503 aa15.49■□□□□ 0.07
CUX2-201ENST00000261726 TRIP13Q15645 432 aaPredicted RBP15.48■□□□□ 0.07
CUX2-201ENST00000261726 ZBTB33Q86T24 672 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 SPATS2Q86XZ4 545 aaKnown RBP15.48■□□□□ 0.07
CUX2-201ENST00000261726 KCTD6Q8NC69 237 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 TLK1Q9UKI8 766 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 MCF2LO15068 1137 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms