RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MAEAQ7L5Y9 396 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 SLF1Q9BQI6 1058 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 SFI1A8K8P3 1242 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 GRB10Q13322 594 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 RSBN1LQ6PCB5 846 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 DDX12PQ92771 950 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 SASH3O75995 380 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 ASTN2O75129 1339 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 A0A1B0GTH6 734 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 PHACTR2O75167 634 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 P2RX7Q99572 595 aaKnown RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
TRAFD1-201ENST00000257604 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 SORBS3O60504 671 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 CYP2C19P33261 490 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 AMPD3Q01432 767 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 CCSER1Q9C0I3 900 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 EDIL3O43854 480 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 ABL1P00519 1130 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 REXO1L1PQ8IX06 675 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 ADSSL1Q8N142 457 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 PNMA5Q96PV4 448 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 CRACR2AQ9BSW2 395 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 BCAS3Q9H6U6 928 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
TRAFD1-201ENST00000257604 KLRC4O43908 158 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 GYPCP04921 128 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CAPN2P17655 700 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CXCL9Q07325 125 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 PLS1Q14651 629 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 HERC4Q5GLZ8 1057 aaPredicted RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 RAD9BQ6WBX8 426 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 HAS1Q92839 578 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 PRR12Q9ULL5 1215 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 TADA3O75528 432 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 PIGOQ8TEQ8 1089 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CHP1Q99653 195 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 MMRN2Q9H8L6 949 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 KCND1Q9NSA2 647 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 SCN9AQ15858 1988 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 MYO1BO43795 1136 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 TUBGCP2Q9BSJ2 902 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 BLOC1S4Q9NUP1 217 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
TRAFD1-201ENST00000257604 ZRANB2O95218 330 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 STAT2P52630 851 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 PSMC6P62333 389 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ARID5AQ03989 594 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 GPBP1Q86WP2 473 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 LAD1O00515 517 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ZBTB39O15060 712 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 LMAN1P49257 510 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 CDKAL1Q5VV42 579 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ZNF341Q9BYN7 854 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-201ENST00000257604 TRAF5O00463 557 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms